Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00268 ATGATTTCCGATTCGAACACCGCCTCTTTGATTTCTTCAGCTTCTGACATCAGCAACAAGAATTTATGCAAGAAGAAGAGGACCAACAGGTCTGCTAAGCTGAAGCAGTGCAAGATTGATGCACGTCGCGAGCAATGGCTCTCTCAAGTTGCTGTCAAGATCAAAGGGTGCAGAGACGGAGGGGACAATGTGCACACATCGCCGATTACTGCGAGGGAAGAAAATCATTCACTTGAGAAATTGGAGGTGGTTACGCCTAGAGATAAAGAGAATGGGGGATCGATTCATCACGACAGTGATTTGGAGTTCCTCTCTAACAGTCCCAATAGTTTTCATAGTAGTGGCTTGGGAGGGAATGACTCTGGGACCAATTTCACGGGGACTAGCAGCAGTAGCAGCAGCAGCAGCAGTGATGGATGCTGCTCTGGGAATATTACAGAGGAAGAAGAATGTGATGATGATGATGGTGGATGTTTGGATGACTGGGAGGCTATGGCTGATGCTTTAGCCACCGATTACAAGCATCGAAATCAGTGTTCCAAGTCTGTCCCTTTGCACGAACCTACAGCTCAAATGGTTCCCACTTGTCATTCGAGTGATCGGCCAGTTTCAGGAATGATGAATTCAAAGCACGAGACTGCAAGATCAATTCAAAGATCCTCTGTGAATAGTTGCCGAGCTTGGAGGCCAGACGATGCTTTTCGCCCTCAGAGTTTGCCGAATCTATCTAAACAACACAGTTTACCTAATCCTGAACGCCATCTTGGAGGAGGGGTGCCATGGGCTTGTAATCCAGCTATGGTTGCACCATCTTCATGCCCCATTTGCTATGAAGATTTAGATTTGACAGACTGGAGCTTTGTACCATGTTTCTGTGGGTTCCGGCTCTGTCTTTTCTGCTACAATAGGATTCTTGAAGATGATGGACGTTGTCCTGGATGCCGGAAACCATACGTGCAACATCCAGTTAAGACAGAGACAAGTGTGCATGGTGGTTGCTTGGCTCTCCCGCTGGCTCGTCCCTGTAGCATGATGGAAAGGTCTTAG 1047 0.4747 MISDSNTASLISSASDISNKNLCKKKRTNRSAKLKQCKIDARREQWLSQVAVKIKGCRDGGDNVHTSPITAREENHSLEKLEVVTPRDKENGGSIHHDSDLEFLSNSPNSFHSSGLGGNDSGTNFTGTSSSSSSSSSDGCCSGNITEEEECDDDDGGCLDDWEAMADALATDYKHRNQCSKSVPLHEPTAQMVPTCHSSDRPVSGMMNSKHETARSIQRSSVNSCRAWRPDDAFRPQSLPNLSKQHSLPNPERHLGGGVPWACNPAMVAPSSCPICYEDLDLTDWSFVPCFCGFRLCLFCYNRILEDDGRCPGCRKPYVQHPVKTETSVHGGCLALPLARPCSMMERS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00268 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 330 IPR013083 -
Pte3g00268 348 ProSiteProfiles Zinc finger RING-type profile. 273 315 IPR001841 -
Pte3g00268 348 SUPERFAMILY RING/U-box 270 325 - -
Pte3g00268 348 CDD mRING-HC-C4C4_CNOT4 272 316 IPR039515 -
Pte3g00268 348 MobiDBLite consensus disorder prediction 100 142 - -
Pte3g00268 348 FunFam RING/U-box superfamily protein 266 331 - -
Pte3g00268 348 Pfam RING/Ubox like zinc-binding domain 273 318 - -
Pte3g00268 348 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 269 341 IPR039780 GO:0004842|GO:0030014
Pte3g00268 348 MobiDBLite consensus disorder prediction 65 142 - -
Pte3g00268 348 MobiDBLite consensus disorder prediction 72 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00268 Pte-Chr3 2276425 2279000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00268 - - qsa:O6P43_030922 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00268 3 2276425 2279000 Pte3g00268 3 2276425 2279000 RCT