Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00255 ATGGAGAATATCCATACCAATTTCGTCTCACTTCCATTTGGGCTTAACGGTAGCAATGACCATACCCCTGCTCAAACAGTCACAGCTACAGAAGGAGATTGTAAAGAACCAGATGATCTTCATCATCCAAAGATGCCTGGTTGGTTTTCTGAGCACTGCCCTATATGGCCAGGACAAGCTCACTTTTTGAAGGTAGAAAATATTTTGTTCCAAGGGAAGTCTGAATATCAAAGTATGATGGTGTTTCAGTCATCTTCCTATGGCAAAGTTTTTATCTTAGACGGGGCACTGCAGCTGACAGAAAAGGATGAATGCTCCTACCAAGAAATGATGACTCATCTTCCTCTTTGTTCTATTTCAGATCCCAAAAAGGTACTGCTAATTGGTGGGGGAGATGGTGGCATACTCAGGGAAATTTCTCGTCACTCTTCTGTGGAGCAGATTGATATATGTGAAATTGATAAAATGCTTGTTGATGTGTATAAACAATTCTTTCCCAATGTTGCTATCGGATATGAGGATCCTCGTGTCACGCTTCATGTTATAGATGGAGTTGTGTTTCTGAATGCTGTTCCAAGAGGAACCTATGATGTTATAATAGTGGATGCTTTTGACCCAATAAGGGCTGATCATGAGCTTTTTGATACTGAATTTTTTGAGTTGGTTTCAAAAGTACTTCGTCCTGGTGGTGTCCTATGCATACAAGCAGAGAGCATATGGTTTAAGCCTCTAAACATGGAGGAATTGCTTAGCAAGTGTCGACAAATATTCAAAGGCACGGTTGATTACGCATGGACTATGGTTCCTGCCTATCCAAGGCAAGCATCCTCCAGCTTAATGATACGTATAATGAATGAAGTATATACATCATATGAAAAGGGCCAGGCGCCATTATATATCCTTCTAACTAGTAACTCCTAA 921 0.4061 MENIHTNFVSLPFGLNGSNDHTPAQTVTATEGDCKEPDDLHHPKMPGWFSEHCPIWPGQAHFLKVENILFQGKSEYQSMMVFQSSSYGKVFILDGALQLTEKDECSYQEMMTHLPLCSISDPKKVLLIGGGDGGILREISRHSSVEQIDICEIDKMLVDVYKQFFPNVAIGYEDPRVTLHVIDGVVFLNAVPRGTYDVIIVDAFDPIRADHELFDTEFFELVSKVLRPGGVLCIQAESIWFKPLNMEELLSKCRQIFKGTVDYAWTMVPAYPRQASSSLMIRIMNEVYTSYEKGQAPLYILLTSNS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00255 306 Gene3D Vaccinia Virus protein VP39 101 299 IPR029063 -
Pte3g00255 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 46 273 IPR029063 -
Pte3g00255 306 Gene3D Spermidine synthase, tetramerisation domain 31 100 IPR037163 -
Pte3g00255 306 NCBIfam fused MFS/spermidine synthase 106 236 - -
Pte3g00255 306 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 125 138 IPR030373 -
Pte3g00255 306 Pfam Spermine/spermidine synthase domain 104 286 - -
Pte3g00255 306 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 46 286 IPR030374 -
Pte3g00255 306 MobiDBLite consensus disorder prediction 16 41 - -
Pte3g00255 306 PANTHER SPERMIDINE/SPERMINE SYNTHASE 39 283 IPR001045 GO:0003824
Pte3g00255 306 Hamap Polyamine aminopropyltransferase [speE]. 47 305 IPR001045 GO:0003824
Pte3g00255 306 Pfam Spermidine synthase tetramerisation domain 47 101 IPR035246 -
Pte3g00255 306 CDD AdoMet_MTases 146 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00255 Pte-Chr3 2175685 2177868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00255 K00797 - qsa:O6P43_030891 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00255 3 2175685 2177868 Pte3g00255 3 2175685 2177868 RCT