Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00212 ATGGAGTCTCTGCAAATCACCCCTGTGTTTGTATCATCATCAACTGTATTGCTTCACCTGAATTCAGTACAGAGAAAAGGTTCAGGAATTGGAAGAAGAGAACTGGGTTTTGCTCCATTGTGGAAAAGAACAAATACAAGATGTGTTTCCTTAAAGCTAAAAACATCAGTTTCTGATTCAGGTGTTCCAAGTGAATCAGATGCCTCTGCTGCGTCTGCGTCTGCGTCTGCTTCACATAATGACGGTGGAGCTTATGCTTTTACTGGTGAAGATAAGGTTCAAAAGGGTCGTGCTTTGGCAAAAGAGTTTGATGCCTCTGGCTCTTTCGTTGGCTTTCAGTTGCTCCCTCACTCTTCAGTATCAGACCCAAGGGATAGCCAAATCATTAATGAAGATACAGGTCCAGATAAAGTGCAAGAAGCTGAGAAAATAGAAGGGGAGGAGAAAGATGCGATCCAAGTAATTTACAACATCATTTTTGTTACAGCTGAAGCTTCACCTTATTCAAAAACAGGAGGCCTAGGAGATGTTTGTGGCTCTTTACCTATAGCTCTGGCAGCTCGTGGACATCGTGTAATGGTTGTCTCCCCCAAATACTTACATGGCGGTCCTAAGGATAAGATTTATGACAATGCAGCGCCTTTAAATTGCAGTGCCAAATTATACTGTTTTGGTGGTGTGCAAGAAGTTTCCTTCTGCCATGAGTACAGGGAAGGTGTCGATTGGGTATTTGTTGACCATCCTTCATATCATAGACCGGGAAACATATATGGGGACAGTTTTGGAGCTTTTGGTGATAATCAGTTTCGGTTCACTTTACTTTGCCATGCAGCATGTGAAGCTCCATTAGTGCTTCCCTTGGGAGGGTTCACTTATGGAGAGAAATGTCTATTCCTCGTCAATGACTGGCATGCTAGCTTAGTTCCTGTACTACTGGCAGCCAAGTACCGGCCTTCTGGGGTATACAAAGATGCGAGAAGCATCCTAGTGATACATAACCTTGCACATCAGGGAGTTGAACCTATGGTGACATACCAAAACTTGGGGCTACCTCCAGAATGGCGAGGGGCATTGGAATGGGTGTTCCCTACATGGGCAAGAACACACGCTCTTGACACAGGTGAAGCTGTCAATTTGCTGAAAGGTGCAATTGTGACAGTTGACAGAATACTGACAGTAAGCCAGGCCTATTCGTGGGAAATTACTACTGCTGAAGGTGGGTACGGTCTGCACGAGCTGTTAAGCAGCAGAAAAAGTGTTCTTAATGGGATCACGAACGGAATTGATATTGCTGAATGGGACCCTTCTGCAGATGAATACATTCCTTCAAATTATTCTGTTGATGACCTGTCGGGAAAGGTTCAGTGCAAGATTTCACTGCAGAAAGAGCTGGGACTTCCAGTCAGGCCAGAATGCCCTTTGATTGGATTCATTGGGAGACTGGACCACCAAAAAGGAATTGACCTAATCCGTGAAGGAATTCCAGAGCTTATGCAAGAAGATGTTCAAGTTATAATGCTGGGCTCTGGGGACCCCCAATATGAAGACTGGATGAGAGCAACAGAACCAACTTATAAAGAAAAATTCCGCGGATGGGTTGGGTTTAGTGTTCCAATTTCTCATAAAATAACAGCAGGATGTGACATATTGTTGATGCCATCAAGATTTGAGCCCTGTGGACTGAATCAATTATATGCAATGAGATATGGAACTGTACCTGTGGTTCATGGTACTGGAGGACTGAGAGATACGGTTCAAAATTTCAATCCTTATGCTGACAATGGCAAAGGGGAAGGCACAGGGTGGACGTTTTCTCCACTAACTAAAGAGAACATGTTGACGGCGATCAGGTATGCAGTTCAGACATACAGAGACCATAAGCCTTCTTGGAATGGATTGATGGAAAGGGGCATGAAGAGGGATTTCACTTGGGAAAATGCTGCCACTCAATACGAACAGGTCTTTCAATGGGCTTTCACTGATCAACCTTATGTAGACTGA 2001 0.4413 MESLQITPVFVSSSTVLLHLNSVQRKGSGIGRRELGFAPLWKRTNTRCVSLKLKTSVSDSGVPSESDASAASASASASHNDGGAYAFTGEDKVQKGRALAKEFDASGSFVGFQLLPHSSVSDPRDSQIINEDTGPDKVQEAEKIEGEEKDAIQVIYNIIFVTAEASPYSKTGGLGDVCGSLPIALAARGHRVMVVSPKYLHGGPKDKIYDNAAPLNCSAKLYCFGGVQEVSFCHEYREGVDWVFVDHPSYHRPGNIYGDSFGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVPVLLAAKYRPSGVYKDARSILVIHNLAHQGVEPMVTYQNLGLPPEWRGALEWVFPTWARTHALDTGEAVNLLKGAIVTVDRILTVSQAYSWEITTAEGGYGLHELLSSRKSVLNGITNGIDIAEWDPSADEYIPSNYSVDDLSGKVQCKISLQKELGLPVRPECPLIGFIGRLDHQKGIDLIREGIPELMQEDVQVIMLGSGDPQYEDWMRATEPTYKEKFRGWVGFSVPISHKITAGCDILLMPSRFEPCGLNQLYAMRYGTVPVVHGTGGLRDTVQNFNPYADNGKGEGTGWTFSPLTKENMLTAIRYAVQTYRDHKPSWNGLMERGMKRDFTWENAATQYEQVFQWAFTDQPYVD* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00212 666 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 152 660 - -
Pte3g00212 666 Gene3D Glycogen Phosphorylase B; 430 641 - -
Pte3g00212 666 Pfam Glycosyl transferases group 1 473 622 IPR001296 GO:0016757
Pte3g00212 666 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 140 663 - -
Pte3g00212 666 Hamap Glycogen synthase [glgA]. 156 658 IPR011835 GO:0004373
Pte3g00212 666 CDD GT5_Glycogen_synthase_DULL1-like 157 657 - -
Pte3g00212 666 Gene3D Glycogen Phosphorylase B; 176 655 - -
Pte3g00212 666 MobiDBLite consensus disorder prediction 57 81 - -
Pte3g00212 666 FunFam Starch synthase, chloroplastic/amyloplastic 157 442 - -
Pte3g00212 666 NCBIfam glycogen/starch synthase, ADP-glucose type 157 656 IPR011835 GO:0004373
Pte3g00212 666 Pfam Starch synthase catalytic domain 157 415 IPR013534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00212 Pte-Chr3 1883377 1889874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00212 155 655 Glycosyltransferase AT3G01180 50.000 8.08e-170 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00212 K00703 - qsu:112034608 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00212 3 1883377 1889874 Pte3g00212 3 1883377 1889874 RCT