Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00187 ATGAAGAAACTTCTTTTGCTTGTTTTTGCGCTTGCCTTGGTTCTGGGAATCGCAAAAAGTTTTCAGTTCCATGAGAAGGATATAGCATCTGAAGAAAGCTTATGGGACTTGTATGAGAGATGGAGGAGCCACCACACTGTTTCCCGGAGCCTTGAACAAAAACAAAAACGTTTCAATGTGTTCAAAGCCAATGTCTTGCATGTTCACAACACCAACCAAAAGGATAAGCCTTACAAGCTCAAGTTGAATAAATTCGCAGACATGACCAACCATGAATTTAGAAGTACTTATGCAGGCTCAAAGATCAGCCACCATAGAATGTTCCGTGGAACGCCACGTGGCAATGGAACCTTCACGTATGAAAAGATCGAGAGTGTCCCTCCATCTGTTGATTGGAGAAAGAAAGGTGCAGTCACAGATGTTAAGGATCAGGGCAAATGTGGTAGCTGCTGGGCATTTTCAACGGTTGTAGCAGTGGAAGGCATCAACCAGATCAAGACAAATAAGCTAGTGTCGTTGTCTGAACAAGAACTAATAGATTGTGACACGATAGAAAATCAAGGATGCAGTGGTGGGATGATGGACATAGCTTTTGAGTTCATCAAGCAACAAGGGGGTATAACTACAGAAAGCGATTATCCTTACAAAGCAGAAGATGGAACTTGTGATGCTTCCAAGGAGAATGCTCCAGCTGTGTCAATTGATGGCCACGAGAATGTGCCTGCCAATGATGAGAACGCATTGCTTAAAGCAGTAGCTAACCAGCCTGTAGCTGTCGCCATTGATGCCGGGGGTTCAGATTTCCAGTTCTACTCCGAGGGAGTGTTTACTGGAGAATGTGGCACAGAGCTTAATCATGGAGTTGCGATTGTGGGGTATGGGACAACCTCAGATGGAACAAAATACTGGATAGTGAAGAATTCATGGGGACCTGAATGGGGAGAGAAGGGTTATATAAGAATGCAACGTGGGGTATCTGATGAGGGACTCTGTGGTATAGCAATGGAGGCGTCTTATCCAATCAAGGAATCCACCTCTGATCTAGCTGCCCCTGCACCTTACACAAAGGACGAACTCTAA 1080 0.4472 MKKLLLLVFALALVLGIAKSFQFHEKDIASEESLWDLYERWRSHHTVSRSLEQKQKRFNVFKANVLHVHNTNQKDKPYKLKLNKFADMTNHEFRSTYAGSKISHHRMFRGTPRGNGTFTYEKIESVPPSVDWRKKGAVTDVKDQGKCGSCWAFSTVVAVEGINQIKTNKLVSLSEQELIDCDTIENQGCSGGMMDIAFEFIKQQGGITTESDYPYKAEDGTCDASKENAPAVSIDGHENVPANDENALLKAVANQPVAVAIDAGGSDFQFYSEGVFTGECGTELNHGVAIVGYGTTSDGTKYWIVKNSWGPEWGEKGYIRMQRGVSDEGLCGIAMEASYPIKESTSDLAAPAPYTKDEL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00187 359 SMART Inhibitor_I29_2 38 93 IPR013201 -
Pte3g00187 359 Pfam Cathepsin propeptide inhibitor domain (I29) 38 93 IPR013201 -
Pte3g00187 359 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 302 321 IPR025661 -
Pte3g00187 359 SMART pept_c1 126 341 IPR000668 GO:0006508|GO:0008234
Pte3g00187 359 SUPERFAMILY Cysteine proteinases 30 341 IPR038765 -
Pte3g00187 359 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 28 339 IPR013128 GO:0008234
Pte3g00187 359 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Pte3g00187 359 FunFam Senescence-specific cysteine protease SAG39 18 342 - -
Pte3g00187 359 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Pte3g00187 359 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Pte3g00187 359 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Pte3g00187 359 PRINTS Papain cysteine protease (C1) family signature 302 308 IPR000668 GO:0006508|GO:0008234
Pte3g00187 359 Pfam Papain family cysteine protease 126 341 IPR000668 GO:0006508|GO:0008234
Pte3g00187 359 Gene3D Cysteine proteinases 13 343 - -
Pte3g00187 359 CDD Peptidase_C1A 127 340 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00187 Pte-Chr3 1746858 1748643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00187 K16292 - tcc:18605008 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00187 3 1746858 1748643 Pte3g00187 3 1746858 1748643 RCT