Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00181 ATGAGGGATTACTATCAACAGCTTGCTGCAATACCCTCTTCCAAAGATTTCCTCAAGGTCCTTGAGGCCGATATTCAACATGCTAATATGCTGGCAGCTTCTATTGCCAGGGACAAGAGTAGCGCTTGTCTCCAAATGAAATTAGTCCACATTCATCTGGCACCACTGCTACTGTTCTTGCTCCAATGCATGGATTGCTCATGTACATGTTTGCTTTCAAATTATTTCAATCCTTTCCACATAATTATCTTTAAGGTGCACGCCGATGGAAAACCAAACATCTCATACTGCAGAAGAAAAGCAACCATTAGAGAATTCTATGGTGTAATATTGCCCTCTCTCCAGCGTCTTCACTGTGATTCCTATGAGTTGGATACTGATCAAGAAGGTCATAGCTTTCAAATTGCTGTCAATAGGACATCTGGTGATGAGAGGAAGCCTTCTGATGTTGATTTAGAAAGGGAAAATGAGTGCGGAATATGCTTGGAGTCCTGCACTAAAATGGTTTTACCTGATTGTTGCCATGCAATGTGTGTCAATTGCTACCATGATTGGAGTACAAGGTCAGAATCTTGCCCTTTTTGCAGGAGAAGTTTAAAGACAGTAAATTCAAGGGACTTGTGGATTCTGACATGCAGTAGCGACGTGGCCGATGTCCACACTGTCCTTCGAGAAGACTTGTCAAGATTTTCTCTTTTTATAAACAGCCTACCTAAGAACATCCCTGATGTTTTATTCTCTTTGTATCATGAGTATTTGTTCTAA 765 0.4105 MRDYYQQLAAIPSSKDFLKVLEADIQHANMLAASIARDKSSACLQMKLVHIHLAPLLLFLLQCMDCSCTCLLSNYFNPFHIIIFKVHADGKPNISYCRRKATIREFYGVILPSLQRLHCDSYELDTDQEGHSFQIAVNRTSGDERKPSDVDLERENECGICLESCTKMVLPDCCHAMCVNCYHDWSTRSESCPFCRRSLKTVNSRDLWILTCSSDVADVHTVLREDLSRFSLFINSLPKNIPDVLFSLYHEYLF* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00181 254 PANTHER RING FINGER PROTEIN 41, 151 15 252 - -
Pte3g00181 254 SUPERFAMILY RING/U-box 147 202 - -
Pte3g00181 254 ProSitePatterns Zinc finger RING-type signature. 173 182 IPR017907 -
Pte3g00181 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 206 IPR013083 -
Pte3g00181 254 Pfam Ring finger domain 156 196 IPR001841 -
Pte3g00181 254 FunFam RING/U-box superfamily protein 138 205 - -
Pte3g00181 254 ProSiteProfiles Zinc finger RING-type profile. 158 196 IPR001841 -
Pte3g00181 254 SMART ring_2 158 195 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00181 Pte-Chr3 1681944 1684123 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00181 - - qsa:O6P43_022602 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00181 3 1681944 1684123 Pte3g00181 3 1681944 1684123 RCT