Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00175 ATGATGGGCATGAAAAGCACCATGATGGGCATGGGAACTCATGGCTATACCTTCCCTGTGGTGAAAAATATCACTTCATTCTATGATGTACCTGAAGGAGTAGACGTTAGGGGACGTTATGATCAAGAGTTCGCTAGAATTCTGACCAAAGAGGCTCTACAATTTGTTGCTGACTTGCAACGTGAGTTCAGAAACCATATCAAATATGCATTGGAGAGTAGGAAGGAGGCAAAGGTGAAGTACAATGAAGGCGGCCTTCCAGGATTTGATCCAGCCACAAAGTTCATCAGAGAAAGTGATTGGGTTTGTGCACCTGTCCCGCCAGCTGTTGCTGATAGGAGAGTCGAGATCACTGGCCCTGTGGAGCGCAAAATGATCATCAATGCACTCAACTCCGGTGCTAAAGTCTTCATGGCTGACTTTGAAGATGCACTCTCACCAAGTTGGGAGAATCTGATGAGGGGGCAAGTGAACTTGCGGGATGCTGTGGAAGGGAGCATCACTTATCATGACAAGGCCAGAAACAGGGTTTATAAACTCAATGAACAGACAGCAAAGCTTTTTGTCCGTCCAAGAGGTTGGCACCTACCTGAGGCGCACATTCTCATTGATGGTGAACCCGCAACGGGTTGCCTTGTTGATTTCGGCCTCTACTTTTACCACAACCATGCAGCATTCAGAAGAACACAAGGTGCAGGATTTGGCCCCTTCTTCTATCTTCCTAAGATGGAGCATTCAAGGGAAGCTAAGATATGGAACAGTGTGTTTGACAGAGCAGAGAAGATTGCAGGCATAGAAAGAGGAAGCATCAGGGCCACAGTTCTTATTGAAACACTTCCAGCTGTGTTTCAAATGAATGAAATTCTGTACGAGCTAAGGGATCATTCAGTGGGTCTCAACTGTGGAAGATGGGACTACATCTTCAGTTATGTCAAGACTTTTCAGTGTCACCCTGATCGCCTTCTTCCTGACAGGGTTCTAGTTGGCATGACTCAACATTTCATGAGGAGTTATTCTAATCTTCTCATCAGGACATGCCATAGGCGTGGTGTTCATGCTATGGGTGGCATGGCAGCACAGATTCCAATTAGAGATGATCCAAAGGCGAACGAGGCAGCACTTGAACTGGTGAGGAAGGACAAGCTAAGAGAGGTTATGGCAGGCCATGATGGAACTTGGGCTGCACACCCTGGCTTGATTCCTGCTTGCATGGAAGTCTTCACCAATATTATGGGGAATGCTCCAAATCAGATTCAAACTGTGAAACGAGAAGATGCTACAAACTTAACCGAGGAAGACCTCTTGCAGAGACCAAGAGGTGTCCGAACCATGGAAGGTCTCCGCTTAAACACCAGAGTTGGCATCCAATACCTGGCCGCTTGGCTGACTGGAGCTGGTTCAGTCCCACTCTACAACCTTATGGAAGATGCTGCAACAGCTGAGATTAGCAGGGTGCAGAACTGGCAATGGCTGAAGTATGGAGTGGAATTGGATGGAGATAGACTTGGAGTTAAAGTGAACAAAGATCTTTTTGGAAGGGTAGTGGAGGAAGAGATGGCTAGGATTGAAAGGGAAGTGGGGAAGGAGAGGTTCAGCAAGGGAATGTACAAAGAGGCTTGCAAGATCTTTACTAGGCAATGCACAGCACCAACTTTGGATGATTTCCTTACTCTTGATGCCTATAATCATATAGTCATGCATCATCCCAGGGGCATATCCAGAATCTGA 1728 0.4664 MMGMKSTMMGMGTHGYTFPVVKNITSFYDVPEGVDVRGRYDQEFARILTKEALQFVADLQREFRNHIKYALESRKEAKVKYNEGGLPGFDPATKFIRESDWVCAPVPPAVADRRVEITGPVERKMIINALNSGAKVFMADFEDALSPSWENLMRGQVNLRDAVEGSITYHDKARNRVYKLNEQTAKLFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFYHNHAAFRRTQGAGFGPFFYLPKMEHSREAKIWNSVFDRAEKIAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIFSYVKTFQCHPDRLLPDRVLVGMTQHFMRSYSNLLIRTCHRRGVHAMGGMAAQIPIRDDPKANEAALELVRKDKLREVMAGHDGTWAAHPGLIPACMEVFTNIMGNAPNQIQTVKREDATNLTEEDLLQRPRGVRTMEGLRLNTRVGIQYLAAWLTGAGSVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDRLGVKVNKDLFGRVVEEEMARIEREVGKERFSKGMYKEACKIFTRQCTAPTLDDFLTLDAYNHIVMHHPRGISRI* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00175 575 Gene3D Malate synthase, domain 3 30 440 IPR046363 -
Pte3g00175 575 NCBIfam malate synthase A 47 564 IPR006252 GO:0004474|GO:0006097
Pte3g00175 575 PIRSF Malate_synth 25 566 IPR006252 GO:0004474|GO:0006097
Pte3g00175 575 Pfam Malate synthase 35 565 IPR001465 GO:0004474|GO:0006097
Pte3g00175 575 Gene3D Malate synthase, domain III 441 565 IPR044856 -
Pte3g00175 575 PANTHER MALATE SYNTHASE 28 569 IPR006252 GO:0004474|GO:0006097
Pte3g00175 575 FunFam Malate synthase 441 565 - -
Pte3g00175 575 FunFam Malate synthase 30 440 - -
Pte3g00175 575 SUPERFAMILY Malate synthase G 31 566 IPR011076 GO:0003824
Pte3g00175 575 ProSitePatterns Malate synthase signature. 293 308 IPR019830 GO:0004474|GO:0006097
Pte3g00175 575 CDD malate_synt_A 47 565 IPR006252 GO:0004474|GO:0006097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00175 Pte-Chr3 1644933 1648150 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00175 K01638 - qsa:O6P43_022577 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00175 3 1644933 1648150 Pte3g00175 3 1644933 1648150 RCT