Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00169 ATGAACAACAACAACAATTCAGTGGCGAAAAATGTCGCGGTAACCGCCATTTATGGAAATTCTGGATCTGCGTCGCAACCTATGCCAGCGAATCACCAGCCCCATCTTCTCTCACAGTCACAACCTGGGTCTCACTTCCCTGGCCACTTTCAGTTGTCTGAGCCTCAAGTACAGGCATTTGGACAGGCACGCACTGCTCAAGCTCACCCAGCTGCTGCTTCGGCACCGTCTCAATCTCAAGTTCAATCTCAGATACCAGCTCAAGCCCGGCCCTTTGGACAGTTTCACAATAACGCTAACGCTAATAATGCTACTGGGACATTGCCGCCCTCTGCTCCAACCACCGGAGGAGGAGGAAGTGCCAAGCGGGCATCTCAAAAGCCGTCTTCTCGTCCTTCTGGATTGTCCAATGCTAATACAGCTTCACATTTTAAGACTATGGAGCTAACTCCAACTGCTCCTAGGAAGAAACCAAGGTTGTCCGAGAAACTGATAGCAGACAAAGTAGCTGCAGTTCTACCTGAATCTGCTCTTTATACTCAGTTGCTAAAATTTGAGGATCGGATTGATGCTGCCTTATACAGGAAGAAGATTGACATACAAGAGTCTCTGAGGAACCCTCCCCGTGTTCAGAGCACGCTGAGGATTTATATATACAACACCTTTGCTAATCAGGGGAAGACAGATTCAGTCAATAAGAATGGAGAGGAACCATCTTGGTCACTTAGAATAACTGGAAGGATTTTGGAAGATGGCAAGGATCCTGTACTAGCTGGAAATTCAACTAGGCCGAATGCTTCATACCCAAAGCTTTCTGCATTCTTTAAGAAGCTTACCATATACTTGGATCAGACCCTTTATCCATATGACAATGTCATTGTGTGGGACAGTGCTCGCTCCTCTGTGGCTCAGGATGGGTTTGAGGTGACCAGAAAAGGAGATAAAGAATTCACTGCAGTTGTCAGAATAGAAATGAATTACATCCCAGAAAAGTATAAACTTTCAGCCCAACTTGCTGAAGTTCTTGGAATTGAAGTTGAGACCCGCCCTAGAATCGTAGCTGCTCTTTGGAATTATATTAAAACTAGAAAATTACAGAGTCCTGGTGATCCTTCCTTCTTTATGTGCAATCCTCCTCTTCAGAAAGTATTTGGTGAAGAGAAGATGAAATTTTCCTTGGCTTCACAGAAGATAACGCAGCATTTATCTCAGCCACAGCCACTACATGTGGAGCATAGAGTCAAGCTTTCTGGAAATTGTCCGATTGGTACTGCTTGTTATGATGCTCTGGTAGACATTCCTCTTCCATTGGAGAAGTATATGCAGTCATTTGTGGCCAACGCAGAAAGAAACAGGGAAATTGATGCTTGCGATGAACGGATTTGTGATTCAATAAAGAGGATTCGCGAGCATAGGCGCAGGCGTGCTTTCTTTCTTGGATTTAGTCAATCTCCAGCGGAGTTCATTAATGCTCTGATTGTTTCTCAGGGCAAGGATCTTAAGCTTGTCGCTGGAGACGCCAATCACATGGTGGAAAAGGAACAACATCATGATTTCTATGTTCAGCCTTGGGTTGATGATGCTGTTATTCGATACTTGAACCGAAAATCTGCTGCAAGTGATGCTCCTGGAACCACTTAA 1641 0.4479 MNNNNNSVAKNVAVTAIYGNSGSASQPMPANHQPHLLSQSQPGSHFPGHFQLSEPQVQAFGQARTAQAHPAAASAPSQSQVQSQIPAQARPFGQFHNNANANNATGTLPPSAPTTGGGGSAKRASQKPSSRPSGLSNANTASHFKTMELTPTAPRKKPRLSEKLIADKVAAVLPESALYTQLLKFEDRIDAALYRKKIDIQESLRNPPRVQSTLRIYIYNTFANQGKTDSVNKNGEEPSWSLRITGRILEDGKDPVLAGNSTRPNASYPKLSAFFKKLTIYLDQTLYPYDNVIVWDSARSSVAQDGFEVTRKGDKEFTAVVRIEMNYIPEKYKLSAQLAEVLGIEVETRPRIVAALWNYIKTRKLQSPGDPSFFMCNPPLQKVFGEEKMKFSLASQKITQHLSQPQPLHVEHRVKLSGNCPIGTACYDALVDIPLPLEKYMQSFVANAERNREIDACDERICDSIKRIREHRRRRAFFLGFSQSPAEFINALIVSQGKDLKLVAGDANHMVEKEQHHDFYVQPWVDDAVIRYLNRKSAASDAPGTT* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00169 546 Pfam SWIB/MDM2 domain 331 402 IPR003121 -
Pte3g00169 546 CDD SWIB_like 334 402 - -
Pte3g00169 546 Gene3D SWIB/MDM2 domain 324 410 IPR036885 -
Pte3g00169 546 SUPERFAMILY SWIB/MDM2 domain 323 412 IPR036885 -
Pte3g00169 546 MobiDBLite consensus disorder prediction 19 47 - -
Pte3g00169 546 ProSiteProfiles SWIB/MDM2 domain profile. 327 404 IPR003121 -
Pte3g00169 546 MobiDBLite consensus disorder prediction 71 147 - -
Pte3g00169 546 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 132 501 - -
Pte3g00169 546 SMART swib_2 328 407 IPR019835 -
Pte3g00169 546 MobiDBLite consensus disorder prediction 19 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00169 Pte-Chr3 1577085 1581021 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Pte3g00169 SWIB 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00169 K11650 - cave:132176278 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00169 3 1577085 1581021 Pte3g00169 3 1577085 1581021 RCT