Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00163 ATGAGAAGGCCATTAGCTAATCCCCACAAGCTCTGCAAGCAATCTGATCCTTTCGATGTTTTGCCCGATGATCTTGTCGTCTACATCCTCTGCAAGCTCAGCTCCTCTGTTTCGTATCCTTCCGAGCTCATTAACATTCTTCTCACATGCAAGAGGATGAATCGTTTGGGTCTGCATCGTTGGGTTCTATCAAAAGCGGGACCGAAAATGTTTGCCATTAAAGCTCAAAATTGGTCGGAGTATGCTCATCGGTTTCTCAAACAGTGTGTAAACGCTGGCAACGTCGATGCCTGCTATACTCTCGGAATGATCCGTTTTTACTGTAAAGAAAACAGAAGGAGCGGTCTAGCTCTCATGGCCAAGGCAGCCATCAAATCTCACGCACCGGCGTTGTACTCACTCGCCGTGATACAGTTCAACGGGAGCGGTGGTTCAAAGCGTGACAAGGATCTAAGAGCCGGTGTCGCTCTCTGTGCCCAAGCAGCTCTGCTGGGCCATGTGGACGCTCTGCGGGAGTTGGGTCATTGCCTTCAAGATGGTTACGGGATACACAAGAACGGGGAGGAAGGGCGACGGCTACTCGTTCAAGCGAACGCACTTGAACTTGCGTTTGTCATACGTGCCGTTGCACAATTGACATCCTCATCCTCATCGTCGGCGTCATCCTCTATGACGTTGCGTCAAAATCGGTATTACCAGTATTTGCGTCAGACGGAGTTAGTTTCCCCGTCACCAAGTAGTCTAGGGCACAACGTGGCTGTTCCAGAAATCCACCCAGCCAACTGGTTTTTAAGGGAGTGGTTCGGGTCGGGTTACGGGAAGTTGAAAGAGGGACTGTCTCTGTGTTCACACATTGGATGTGGACGACCGGAGACCCGGCCACACGAGTTCAGACGATGTTCAGGTTGTGGGAAAGTGAACTACTGCTCGCGTGGCTGTCAAGCGCTTGATTGGAAGCTGAGGCACAAAGCAGATTGCTCCCCTGTCGAAGTCGTGCTTGACGTGCAGAGGGAAGAAGAGAATGGAGAATGA 1032 0.5107 MRRPLANPHKLCKQSDPFDVLPDDLVVYILCKLSSSVSYPSELINILLTCKRMNRLGLHRWVLSKAGPKMFAIKAQNWSEYAHRFLKQCVNAGNVDACYTLGMIRFYCKENRRSGLALMAKAAIKSHAPALYSLAVIQFNGSGGSKRDKDLRAGVALCAQAALLGHVDALRELGHCLQDGYGIHKNGEEGRRLLVQANALELAFVIRAVAQLTSSSSSSASSSMTLRQNRYYQYLRQTELVSPSPSSLGHNVAVPEIHPANWFLREWFGSGYGKLKEGLSLCSHIGCGRPETRPHEFRRCSGCGKVNYCSRGCQALDWKLRHKADCSPVEVVLDVQREEENGE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00163 343 SUPERFAMILY HCP-like 77 203 - -
Pte3g00163 343 Gene3D Tetratricopeptide repeat domain 56 224 IPR011990 GO:0005515
Pte3g00163 343 Gene3D - 275 330 - -
Pte3g00163 343 ProSiteProfiles Zinc finger MYND-type profile. 284 326 IPR002893 -
Pte3g00163 343 FunFam Predicted protein 274 331 - -
Pte3g00163 343 SUPERFAMILY F-box domain 13 74 IPR036047 GO:0005515
Pte3g00163 343 Pfam MYND finger 287 326 IPR002893 -
Pte3g00163 343 PANTHER MYND DOMAIN-CONTAINING 10 340 IPR044508 -
Pte3g00163 343 SUPERFAMILY HIT/MYND zinc finger-like 281 329 - -
Pte3g00163 343 CDD F-box_SF 21 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00163 Pte-Chr3 1564283 1566181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00163 - - qsa:O6P43_030723 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00163 3 1564283 1566181 Pte3g00163 3 1564283 1566181 RCT