Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00160 ATGGCGGCTACTACTCGCAACTTCCCAACTCCACCTTCATCTTCTTCTTTTCCCCTCAGCTCCAAATCCCATAATACATGTTTCAGATTTAGATTTCCCGTTTCCTCAACTCACAAAAAAGTGACTCTCCGTCGTGTCCTTTACTTTTCCAGCTCTCTCCCCAACCCCAAACTAGTGTCCGCCGCCACCGTTACCACCACACCAGCCACCATTTCTACCACAGAAGATTCTCCTGCTTTCACTTCCAGATTTGCCGCTGACGAGCCCAGGAAAGGAGCTGATGTCCTCGTGGAGGCCCTTGAGCGCCAAGGTGTTACTAATGTTTTCGCATACCCAGGTGGTGCTTCCATGGAGATTCACCAAGCTCTCACGCGTTCCAAAACTATCCGCAATGTCCTGCCTCGGCATGAGCAAGGTGGAATCTTTGCAGCTGAAGGATATGCCCGCTCCTCTGGTCTTCCTGGCGTCTGTATTGCCACCTCGGGTCCCGGAGCCACCAATTTGGTGAGTGGACTTGCAGACGCGTTGCTTGATAGCGTTCCTGTTGTCGCCATTACAGGACAAGTCCCTCGAAGAATGATCGGTACTGATGCGTTTCAAGAGACACCAATAGTTGAGGTGACAAGATCTATTACTAAGCACAACTATCTTGTTCTTGATGTTCATGACATACCTAGGGTTGTGAATGAGGCATTTTTCTTAGCTAATTCTGGGAGACCTGGTCCTGTGTTGATTGATATACCCAAAGATATACAACAACAGTTAGTGGTGCCCGATTGGGACCAACCCATGAAGTTAGGTGGTTACAGGTCTAGGTTGCCTAAGTCTGTGGATGATTCCCATTTAGAGCAGATTGTGAGGTTGATATCCGAGTCTAAGAGACCTGTACTCTATGCTGGTGGGGGTTGCTTGAATTCTAGTGAGGAGTTGAGACGCTTTGTGGACCTCACTGGAATCCCTGTAGCTAGTACTTTGATGGGCTTAGGGGCATATCCAACTGCTGATGAGTATTCGCTGCAAATGCTTGGAATGCATGGAACTGTTTATGCTAATTTTGCTGTGGATCAATGTGACCTGTTACTTGCATTTGGGGTTAGGTTCGACGACCGTGTGACTGGGAAGCTTGAAGCTTTTGCTAGCCGAGCCAAAATCATTCATATAGACATTGATGCGGCTGAGATTGGAAAGAATAAGCAACCCCATTTGTCGATTTGTACTGATCTGAAGTTGGCCTTGACAGGACTCAACATAATGTTGGAGAGCAACGTACCTAAGGGAAAATATGATTTTGAAGCTTGGAGGAAAGAGTTGAATGAACAGAAACTGAAATTCCCGTTGAGTTATAAGACTTTTGGAGAAGCTATTCCTCCTCAATATGCTATTGAGGTTCTTGATGAACTTACAGATGGAAGTGCAATTATAAGCACTGGTGTTGGACAGCATCAGATGTGGGCTGCACAGTTTTACAAATATAAGAGGCCAAGGCAGTGGTTAACATCTGGAGGTCTTGGGGCAATGGGTTTTGGACTGCCCGCTGCAATGGGGGCTGCGGTGGCCAACCCTGATTCTGTCATAGTAGATATTGATGGAGATGGTAGCTTTATTATGAATGTGCAGGAGCTTGCAACTATTAAGGTAGAAAATCTTCCTATTAAGATAATGCTATTGAACAACCAGCATTTGGGTATGGTTGTTCAGTGGGAAGATAGATTTTACAAGGCTAATAGAGCTCATACATATCTGGGAGACCCTTCAAATGAGTCTGAAATATTCCCCAACATGTTGAAGTTTGCAGAGGCATGTGGAGTACCGGCAGCTCGGGTGACGAAGAAGGCAGACCTTAGAGCAGCGATCCAGAAAATGTTGGACACCCCTGGACCTTATCTACTTGATGTGATTGTCCCTCATCAAGAACACGTCTTGCCGATGATTCCCAGTGGGGGGTCCTTCAAGGATGTCATTACCAAGGGTGATGGTCGATAA 1983 0.4639 MAATTRNFPTPPSSSSFPLSSKSHNTCFRFRFPVSSTHKKVTLRRVLYFSSSLPNPKLVSAATVTTTPATISTTEDSPAFTSRFAADEPRKGADVLVEALERQGVTNVFAYPGGASMEIHQALTRSKTIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALLDSVPVVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVHDIPRVVNEAFFLANSGRPGPVLIDIPKDIQQQLVVPDWDQPMKLGGYRSRLPKSVDDSHLEQIVRLISESKRPVLYAGGGCLNSSEELRRFVDLTGIPVASTLMGLGAYPTADEYSLQMLGMHGTVYANFAVDQCDLLLAFGVRFDDRVTGKLEAFASRAKIIHIDIDAAEIGKNKQPHLSICTDLKLALTGLNIMLESNVPKGKYDFEAWRKELNEQKLKFPLSYKTFGEAIPPQYAIEVLDELTDGSAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAMGAAVANPDSVIVDIDGDGSFIMNVQELATIKVENLPIKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSNESEIFPNMLKFAEACGVPAARVTKKADLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGSFKDVITKGDGR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00160 660 NCBIfam biosynthetic-type acetolactate synthase large subunit 91 655 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Pte3g00160 660 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 477 632 IPR011766 GO:0003824|GO:0030976
Pte3g00160 660 Gene3D - 447 633 - -
Pte3g00160 660 ProSitePatterns Thiamine pyrophosphate enzymes signature. 514 533 IPR000399 GO:0000287|GO:0030976
Pte3g00160 660 MobiDBLite consensus disorder prediction 1 22 - -
Pte3g00160 660 Gene3D - 282 446 - -
Pte3g00160 660 FunFam Acetolactate synthase, mitochondrial 445 659 - -
Pte3g00160 660 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 87 265 IPR029061 -
Pte3g00160 660 Pfam Thiamine pyrophosphate enzyme, central domain 283 414 IPR012000 GO:0000287|GO:0030976
Pte3g00160 660 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 455 654 IPR029061 -
Pte3g00160 660 FunFam Acetolactate synthase 85 268 - -
Pte3g00160 660 Gene3D - 79 273 - -
Pte3g00160 660 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 91 256 IPR012001 GO:0030976
Pte3g00160 660 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 89 652 IPR045229 -
Pte3g00160 660 SUPERFAMILY DHS-like NAD/FAD-binding domain 277 445 IPR029035 -
Pte3g00160 660 FunFam Acetolactate synthase 275 446 - -
Pte3g00160 660 CDD TPP_AHAS 455 647 IPR039368 GO:0030976
Pte3g00160 660 CDD TPP_PYR_POX_like 94 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00160 Pte-Chr3 1548029 1550011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00160 K01652 - qsa:O6P43_022539 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00160 3 1548029 1550011 Pte3g00160 3 1548029 1550011 RCT