Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00147 ATGCATTTCATTCACTATTGTTTCACGAACGTTACACTTTCTATTTTCATGTATTGGACGCTTCTTTTCTTTCTTCCTCCTTACGTCCTCTACAGCATTCTCGGTTTCATTAAAAGATCCAGATTCTCTGAGAACGTGGCTGGAAAAGTCGTTCTCATTACTGGGGCATCTTTAGGAATCGGACAGCATTTGGCGTATGAGTATGCACAAAGAGGAGCTCGTTTGGCTCTAGTGGCTAGAAGAGAGGGTCGTCTGCGTGAAGTGGCAGAAAAAGCTCGGGAGCTGGGATCGATGGATGTGATAGTGGTTTGTGCTGATGTCTCCAAGATCGATGATTGTAAGCGTTTCGTTGACGAGACAGTGACCCACTTCGGCACATTGGATCATTTGGTCAATAATGCTGGAATTCTTCAGACAAAGTCTTTCGCCGATTACACTGAAGAGTTCTCTGATTTGGCTCCAATAATGGATGTGAATTTTTGGGGTTCAGTGTATACCACCAAGTTTGCAATCCCGTACTTGAGAAAAAGCAGAGGAAAGATTGTTGTTATTGCCTCAGCCGCTGCATATCTTCCGACACCAAAATTGAGCTTCTACGATGCAAGCAAAGCAGCATTAGTGAGTTTTTTCGAGACATTAAGGATGGAACTGACCCCAAATATTGGTATAACTATAGTAACCCCTGGAATGATCAACTCAGATATGATTCAAGATGCCTTCTTAACTGAGGTCATGAAGGTGAACTCCATTCAAGCGATGGCTGCAGAAGTCTGTGCCAAGTCAATTGTGGACAGCGCTTGCCGTGGAGATAAGCATTTGACTGAGCCATCGTCGGTGAAGTTGCTCATTCGGTTTAAAACTTTCTTCCCTGCGCTATTTGAGTGGTCTCAACGTTCCATTTGCATCAAAAGGCTTGAAGATTCCAAAAAAGATGCATGA 939 0.4356 MHFIHYCFTNVTLSIFMYWTLLFFLPPYVLYSILGFIKRSRFSENVAGKVVLITGASLGIGQHLAYEYAQRGARLALVARREGRLREVAEKARELGSMDVIVVCADVSKIDDCKRFVDETVTHFGTLDHLVNNAGILQTKSFADYTEEFSDLAPIMDVNFWGSVYTTKFAIPYLRKSRGKIVVIASAAAYLPTPKLSFYDASKAALVSFFETLRMELTPNIGITIVTPGMINSDMIQDAFLTEVMKVNSIQAMAAEVCAKSIVDSACRGDKHLTEPSSVKLLIRFKTFFPALFEWSQRSICIKRLEDSKKDA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00147 312 Gene3D - 37 306 - -
Pte3g00147 312 PANTHER RETINOL DEHYDROGENASE-RELATED 47 298 - -
Pte3g00147 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 IPR002347 -
Pte3g00147 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 IPR002347 -
Pte3g00147 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Pte3g00147 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 297 IPR036291 -
Pte3g00147 312 PRINTS Glucose/ribitol dehydrogenase family signature 219 236 IPR002347 -
Pte3g00147 312 PRINTS Glucose/ribitol dehydrogenase family signature 199 218 IPR002347 -
Pte3g00147 312 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Pte3g00147 312 PRINTS Glucose/ribitol dehydrogenase family signature 173 189 IPR002347 -
Pte3g00147 312 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Pte3g00147 312 Pfam short chain dehydrogenase 49 239 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00147 Pte-Chr3 1464057 1466079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00147 44 235 Acyl Lipid Metabolism Gene Families AT1G24360 32.308 8.04e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00147 K22418 - qsu:111990198 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00147 3 1464057 1466079 Pte3g00147 3 1464057 1466079 RCT