Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00128 ATGGCCGAGATTCAGCCACCGGAGGGTCAGATTAATGGTGGAGGAGGGTTGATGGTTACCTCTTTGGAGGCGGCTGGATCCAAGAGGCAGCGTAGGCCGAGTGTCCGATTGGGTGACATCGGAGACCAGCCCTATGAGTCACATGTGCGTCGAAGCAACAAGCATTGGAAGATGGGTCCTGATGGAAGGAAGGACCCTAATGCTTCAGGGAAAGCCTCAAAGACTCGACCTTTAATGAATTTTAGCTCTGGGGGAGAGGGAGGGGGAGTAGGTGGTGGTGGGTATAACGAAACCCTAGATGGAGAAGACAAAGAAGGTAACTTGGATAGTGTGGCTATTGGTAGCTGGAGAGTCAAGGACTTCAAGAGGAGAGGTACGGTTACAACCAAGAGGGTAAGATCGAATTGGGTCTCAAGAATCGACGAAGGTGGCGGTGGCCCTGGTGGATGTGGTGAAGGAGATGAGAGATACAGCGCCGGCGAAGATATTGATGATGGGTATCGGGATTTTGATTTGGAGAACTCGGAAAGCCCCTTGAAAGATCAAAGCCCCATTAATTTGCTTGAGAATTTGGCTGTCGATGGGCATGGGCATGAGAGGGAGGTGCAGTATCTTGGTAATAGAAGAGCTATAAGGGCTAGGGGTTCCGAAGGTAGGGAACATCTTGATGGGGTTGAGTTATCCGGTCCGTCTGATACGGATGGGAGGGATTGGAAATGTGGTGAAAGGAATGGAAATGATGAAGGAGGAAAATGCGGAGAAAGTAGTGTGAGGATTTGGCTTAACGGTCTAGGTTTAGGACGTTATGCTCCTGTTTTCGAAATACATGAGGTTGACGATGAGGTATTGCCAATGTTAACGCTGGAGGATCTTAAGGATATGGGGATAAATGCTGTTGGATCGAGAAGAAAAATGTATTGTGCAATTCAGAAGCTTGGGAAGGGATTTTCGTGA 954 0.4874 MAEIQPPEGQINGGGGLMVTSLEAAGSKRQRRPSVRLGDIGDQPYESHVRRSNKHWKMGPDGRKDPNASGKASKTRPLMNFSSGGEGGGVGGGGYNETLDGEDKEGNLDSVAIGSWRVKDFKRRGTVTTKRVRSNWVSRIDEGGGGPGGCGEGDERYSAGEDIDDGYRDFDLENSESPLKDQSPINLLENLAVDGHGHEREVQYLGNRRAIRARGSEGREHLDGVELSGPSDTDGRDWKCGERNGNDEGGKCGESSVRIWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGINAVGSRRKMYCAIQKLGKGFS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00128 317 SMART SAM_4 249 315 IPR001660 GO:0005515
Pte3g00128 317 Pfam SAM domain (Sterile alpha motif) 254 312 IPR001660 GO:0005515
Pte3g00128 317 CDD SAM_superfamily 256 311 - -
Pte3g00128 317 Gene3D - 252 312 IPR013761 -
Pte3g00128 317 SUPERFAMILY SAM/Pointed domain 253 312 IPR013761 -
Pte3g00128 317 PANTHER SCP160 231 314 - -
Pte3g00128 317 MobiDBLite consensus disorder prediction 138 165 - -
Pte3g00128 317 MobiDBLite consensus disorder prediction 1 103 - -
Pte3g00128 317 ProSiteProfiles SAM domain profile. 256 315 IPR001660 GO:0005515
Pte3g00128 317 MobiDBLite consensus disorder prediction 43 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00128 Pte-Chr3 1321585 1322538 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00128 - - qsa:O6P43_030676 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02490 2 44129957 44131242 Pte3g00128 3 1321585 1322538 RCT
Pte3g00128 3 1321585 1322538 Pte3g00128 3 1321585 1322538 RCT