Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00117 ATGGCGAAAGAGAACGGAAATTCAGCTATGGAAATTGACGATCAGATCACTCCAAAATTCTCTGTGAACGTGCTGCAGCTTCTCAAATCTGCTCAAATGCAACATGGGTTACGGCATGGGGATTATACTCGCTACCGGAGGTATTGTACAGCTCGATTGAGGAGGTTGTACAAGTCTCTGAAATTCACCCATGGGCGGGGCAAGTACTCACGGAGAGCAATAACTGAATCTACTGTTACTGAAGTGAGGTATCTTCACATAGTTCTTTACACCGCAGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGATTCCAGATGGACCCTCCCCACGACAAAGAATCTATCTAATCGGTAGGCTCCGAAAGGCAGTGAAATGGGCTACTCTATTTTCACAGTTGTGTGCGGTGAAAGGAGATTCCAGAACTTCCTTAGAAGCTGAGGCGTATGCATCTTACATGAAAGGAAACTTATTATTTGAACAAGATCAAAATTGGGAGACAGCTCTGATGAACTTCAAAAGTGCCAGGGCTGTATACGAGGAATTAGGAAAATATGGAGATCTTGAAAATCAAGTTTTGTGTCGGGAGCGGGTTGAAGAACTGGAACCCAGTATTCGGTATTGCCTACACAAGATTGGCGAGTCAAATCTTCAGGCCTCTGAACTTTTACACATTGGTGAAATGGAAGGTCCTGCTCTGGATCTTTTCAAATCCAAACTAGAGGCTGTAATGGCAGAAGCAAGATCTCAGCAAGCTGCTTCCATGACTGAGTTTAATTGGCTTGGTCATAGATTTCCAATATCCAATGGAAAAACCCGGGTTGCCATTCTTAAGGCACAAGAGCTGGAGAAAGAGTTACATGGTCCCTCGGCAGATTCAATTCCTGCAGATAAAAGACTGGTTATTTTTGACAAAATCTTCTCGGCATACCACGAAGCTAGAGGCTACATTCGGACTGATTTGTCCACTGCAGGCAATGCTGAAAGTGTGAAAGATGATTTGAATGGTCTAGATAAGGCTGTCAGTGCTGTTCTGGTAGAGAGAACTATAGAGCGCAATCTATTGTTGGTTAAAATTGCTAAGAGTAAACTGGCTAAGCGTCGAGACGAAAAAAATGAGAAAGTTACTAAGCCAGAAGAGCTTGTTCGTCTATTTGATCTTCTGTCCCAGAATATTGCTGAACTTTCAGACTTAGTCAGTTCTGGAAGGGATAAAAAACCTGAGGAAGTGAGCTTCTCTGAGGAGTGTGCAGCCAAAAGTTTGGCTTTTCGAGTTGAAAGGTGCTTTTATGTGGCACAATCATATAGCTCTGCTGGAAAGAGGGCAGAAGCATATGTATTGTACTGTCGTGCTCGTTCTTTAGCAGAGGAAGGCCTAAGACAACTTCGAAGCTTGAATAGCAATAATGAGGTTATGATCAAAGAGTTAGAGTCATTATGCAACCAGAGTAGGTCTAACAGTTGCATAGAGCATGCCTTGGGAGTTATGGAAGATGAGAAGGTTCCAGAGAATCTTTCGGAAAAGATATCTACCATATCATTAAGTGGAAACGTGAAGAAGCTGGAGAAGTATCTACTCGAGAAACTGGACGTCTATGAGTCTGCAGTGGGTGTCTCGAATGCTAAGAGTATTCCTCGCATTGCTGCCTTTCCTCCAGCTTTCCACACAGTTCCTCGCAGTCCTATTGTTTTGGACTTGGCGTACAACGCCATTGAGTTCCCGTCTCTCGATAATAGAATGAAAAAGGACAGAAAGGGATTCATAAGTAGACTGTGGAGGTGA 1785 0.4353 MAKENGNSAMEIDDQITPKFSVNVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYSRRAITESTVTEVRYLHIVLYTAERAWSHAMEKRQIPDGPSPRQRIYLIGRLRKAVKWATLFSQLCAVKGDSRTSLEAEAYASYMKGNLLFEQDQNWETALMNFKSARAVYEELGKYGDLENQVLCRERVEELEPSIRYCLHKIGESNLQASELLHIGEMEGPALDLFKSKLEAVMAEARSQQAASMTEFNWLGHRFPISNGKTRVAILKAQELEKELHGPSADSIPADKRLVIFDKIFSAYHEARGYIRTDLSTAGNAESVKDDLNGLDKAVSAVLVERTIERNLLLVKIAKSKLAKRRDEKNEKVTKPEELVRLFDLLSQNIAELSDLVSSGRDKKPEEVSFSEECAAKSLAFRVERCFYVAQSYSSAGKRAEAYVLYCRARSLAEEGLRQLRSLNSNNEVMIKELESLCNQSRSNSCIEHALGVMEDEKVPENLSEKISTISLSGNVKKLEKYLLEKLDVYESAVGVSNAKSIPRIAAFPPAFHTVPRSPIVLDLAYNAIEFPSLDNRMKKDRKGFISRLWR* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00117 594 FunFam Signal recognition particle subunit SRP68 19 216 - -
Pte3g00117 594 Coils Coil 463 483 - -
Pte3g00117 594 CDD SRP68-RBD 23 211 IPR034652 GO:0003723
Pte3g00117 594 Pfam RNA-binding signal recognition particle 68 37 572 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Pte3g00117 594 PIRSF SRP68 20 588 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Pte3g00117 594 Gene3D - 19 216 IPR038253 GO:0003723
Pte3g00117 594 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 13 590 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00117 Pte-Chr3 1150495 1155324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00117 K03107 - qsa:O6P43_023508 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00117 3 1150495 1155324 Pte3g00117 3 1150495 1155324 RCT