Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00114 ATGGAGGAGAGCCAAATTAGGTTGATGAGAACATTAGTTGAAAGCAAAGATTCATCCTCTAAGGAACAGGATGATAGGATGCTTAGAAGATTCTTGCGCGCTCGTGGTTTAGATATAGAGAAGGCAGCAGCTCTGTTCCTTGAGTACTTGAATTGGAGAAGATCGTTTGTCCCTAATGGTACTATTTCTGTGTCGGAGATACCAAACGAGATTGCTCAGAACAAAATGTTTCTGCAAGGATTCGACAAGAAAGGACGTCCTATATCAGTGGTTTTTGGTGATCGTCATTTTCCCTATAATAATAGTCTTGAAGAATTCAAAAGATTTGTGGTGTATGCTCTGGATAAAATATGTTCATGCATGCCACCAGGAGAGGAGAAATTTGTTGTGATAGGAGATCTTAAAGGATGGGGCTATTCAAACTGTGACATCCATGGATATCTTGCAGCTCTGTCTATTTTGCAGGATTATTACCCAGAGAGGCTAGGAAAGCTTTTCATTGTCCACTCACCAAGTATCTTCATGACAGTTTGGAAGATCGTCTACCCTTTCATCGACAAAAATACAAAGAAGAAGGTGAATCATTGGATCAGTCCCCTTAATCTACTTTTAATTACTTTCATTCATGTGTATACCAGAGATGTTGTGTTTCAATGCAGATAG 663 0.3937 MEESQIRLMRTLVESKDSSSKEQDDRMLRRFLRARGLDIEKAAALFLEYLNWRRSFVPNGTISVSEIPNEIAQNKMFLQGFDKKGRPISVVFGDRHFPYNNSLEEFKRFVVYALDKICSCMPPGEEKFVVIGDLKGWGYSNCDIHGYLAALSILQDYYPERLGKLFIVHSPSIFMTVWKIVYPFIDKNTKKKVNHWISPLNLLLITFIHVYTRDVVFQCR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00114 220 CDD SEC14 77 208 IPR001251 -
Pte3g00114 220 Pfam CRAL/TRIO domain 74 194 IPR001251 -
Pte3g00114 220 SUPERFAMILY CRAL/TRIO N-terminal domain 2 60 IPR036273 -
Pte3g00114 220 SMART CRAL_TRIO_N_2 24 49 IPR011074 -
Pte3g00114 220 Gene3D - 2 209 IPR036865 -
Pte3g00114 220 PANTHER OS03G0850700 PROTEIN 2 193 - -
Pte3g00114 220 SMART sec14_4 70 220 IPR001251 -
Pte3g00114 220 SUPERFAMILY CRAL/TRIO domain 67 194 IPR036865 -
Pte3g00114 220 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 64 193 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00114 Pte-Chr3 1105097 1107559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00114 28 194 Acyl Lipid Metabolism Gene Families AT1G55840 25.263 5.56e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00114 - - qsa:O6P43_023496 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00114 3 1105097 1107559 Pte3g00114 3 1105097 1107559 RCT