Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00093 ATGGCAGCTGAGCTCGTCAATTCTGCTACAAGTGAGAAACTGAATGAAGTGGATTGGACCAAGAACATTGAGATTTGTGAATTAGTTGCTTGTGATCAAAGGCAAGCTAGAGATGTCATTAAAGCAATCAAGAAAAGGTTGGGAAGTAAAAGTCCAAATACTCAGCTTTATGCAGTGATGTTGTTGGAGATGTTAATGAACAACGTTGGAGAAAATGTCCACAGGCAGGTGATTGATACAGGAATAATTCCTATCCTTGTGAAGATTGTGAAGAAAAAGTCAGATTTGCCTGTACGTGAGCGTGCCTTCCTCCTTTTGGATGCCACTCAAACATCACTTGGCGGTGCTTCTGGAAAGTTTCCCCAATACTATAAGGCATATTATGAATTGGTGAGTGCAGGCGTGAAGTTCCCTGAAAGGCCTCATGTTGTCCAACCCAGTCTTCCTACTAGCCAACAAAGTCAAGTTAAAAATATAATTAATGGAGAGCCTGCGCTCTCTAGAGATGAAGGTGTTGCGCATACACCAGAGGCTCAAAATGTTTCTGAACCTAGTATACTTCAAAAGGCTAGCAACTCGTTGGAGGTTCTAAAAGAAGTTCTTGATGCTGTTGATCCTCAGCATCCTGAGGGAGCAAGGGATGAGTTCACTCTTGACCTTGTGGAACAATGCTCATTTCAAAAGCAGAGGGTAATGCATCTTGTGATGGCTTCCCAGGATGAGATGATAGTTTCCCGAGCCATTGAATTAAATGACCAGCTTCAGAGAGTTCTTGAAAGACACGATGGTCTGATTTCATGTAGACCCACCTCAAACACAAACCACTTCAACCATGGAGACGCTGAGGAGGAAGAAGAGGAACAGCTTTTCCGGAGATTACGAAAAGGAAAGGCTTGTGCAAGGCCTGAGGATGATAAACCTGCAGTGGGGCAACCAAACTTGGGATCATCCTTCTCTAAAGAAAGGAGAAATCTGCCACTTATACGACCACTCCCTTTGGAGCCATCCCCTGGACCAAATTCTCATTCTGCCATTAGCATCCGACCTACTCCCATTCAAAACATGGAAAGTGAGCATGTAGGCCCTCCTCATGTTGCGATTCCCCCACCTCCTGCAAAACACGTCGAGAGGGAGCGGTACTTTCAGGCAAACAAGACAGATGGCTCTATCTTGGCTGGACACATGAGGGGCCTTTCGCTACACAGTCGCAATGCCAGTAGTTCTCATAGTGAAAGTTTCGATTCTAGTGATTAA 1254 0.4474 MAAELVNSATSEKLNEVDWTKNIEICELVACDQRQARDVIKAIKKRLGSKSPNTQLYAVMLLEMLMNNVGENVHRQVIDTGIIPILVKIVKKKSDLPVRERAFLLLDATQTSLGGASGKFPQYYKAYYELVSAGVKFPERPHVVQPSLPTSQQSQVKNIINGEPALSRDEGVAHTPEAQNVSEPSILQKASNSLEVLKEVLDAVDPQHPEGARDEFTLDLVEQCSFQKQRVMHLVMASQDEMIVSRAIELNDQLQRVLERHDGLISCRPTSNTNHFNHGDAEEEEEEQLFRRLRKGKACARPEDDKPAVGQPNLGSSFSKERRNLPLIRPLPLEPSPGPNSHSAISIRPTPIQNMESEHVGPPHVAIPPPPAKHVERERYFQANKTDGSILAGHMRGLSLHSRNASSSHSESFDSSD* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00093 417 PANTHER TOM1-LIKE PROTEIN 1 403 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pte3g00093 417 Pfam VHS domain 4 107 IPR002014 GO:0035091|GO:0043130
Pte3g00093 417 Gene3D - 2 136 IPR008942 -
Pte3g00093 417 SUPERFAMILY GAT-like domain 185 265 - -
Pte3g00093 417 CDD VHS 2 130 - -
Pte3g00093 417 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Pte3g00093 417 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Pte3g00093 417 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Pte3g00093 417 Gene3D - 177 274 IPR038425 -
Pte3g00093 417 Pfam GAT domain 192 264 IPR004152 GO:0035091|GO:0043130
Pte3g00093 417 FunFam TOM1-like protein 2 1 148 - -
Pte3g00093 417 MobiDBLite consensus disorder prediction 298 319 - -
Pte3g00093 417 SUPERFAMILY ENTH/VHS domain 4 140 IPR008942 -
Pte3g00093 417 CDD GAT_GGA-like_plant 186 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00093 Pte-Chr3 925542 929867 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00093 - - qsu:112038341 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00093 3 925542 929867 Pte3g00093 3 925542 929867 RCT