Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00059 ATGACGAAGTTCAGGAAGCTCAATCGGCCTACGGGTCATCGGATGTCAATGCTTAGGACAATGGTATCGCAGTTGGTGAAACATGAGCGCATCGAGACAACTGTCGCAAAGGCCAAAGAGGTTCGACGGCTAGCTGATAATATGATACAGCTAGGAAAAGAGGGTACTCTCTGTGCAGCGAGACGTGCAGCTGGTTTTGTGAGAGGAGATGATGTCCTGCACAAGCTATTTACAGAACTGGCATATAGATACAAGGACAGAGCAGGTGGATACACTAGATTGCTTCGCACACGTATTCGAGTGGGAGATGCTGCACCGATGGCTTATATTGAGTTCATCGACCGTGAGAATGAACTTAGACAATCCAAGCCAGCCGCTCCTCAGCCTCCGCAGAGAGTGCCTCTTGATCCGTGGACAAAATCACGCCTCAGCAGGCAGTTCGCACCACCTAAAGAGAAGAAAGACGATGATGTATGA 477 0.4927 MTKFRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMIQLGKEGTLCAARRAAGFVRGDDVLHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRQSKPAAPQPPQRVPLDPWTKSRLSRQFAPPKEKKDDDV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00059 158 Gene3D Ribosomal protein L17 1 113 IPR036373 GO:0003735|GO:0005840|GO:0006412
Pte3g00059 158 PANTHER RIBOSOMAL PROTEIN L17 2 135 IPR000456 GO:0003735|GO:0005840|GO:0006412
Pte3g00059 158 Pfam Ribosomal protein L17 17 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Pte3g00059 158 Hamap 50S ribosomal protein L17 [rplQ]. 2 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Pte3g00059 158 MobiDBLite consensus disorder prediction 119 158 - -
Pte3g00059 158 SUPERFAMILY Prokaryotic ribosomal protein L17 3 116 IPR036373 GO:0003735|GO:0005840|GO:0006412
Pte3g00059 158 NCBIfam 50S ribosomal protein L17 4 114 IPR000456 GO:0003735|GO:0005840|GO:0006412
Pte3g00059 158 FunFam 50S ribosomal protein L17 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00059 Pte-Chr3 734407 736122 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00059 K02879 - sind:105178101 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00059 3 734407 736122 Pte3g00059 3 734407 736122 RCT