Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00031 ATGGCGACTCGATCTCCATGTCCATTTCTATGGTTGCGGCTAGTAATGGCTTTATTTTTCCTTCTGGTTAAGAATGAGGCTATGATCTTGTATTCTTCGAGGCTGATTCATCGTTTCTCGGATGAAATGAAGTCGCACCTTAAGGTTTCAAAACCAGCTAGTGAGGATTGGCCGTGGCCGGAGAGGAACACTATGCGCTATTATGAGATGCTCCTCAATACTGACTTTGAGAGGCACAAGAGGAAGCTCGGAGCTCACTATCAGCTGCTTTATCCATCTCGTGGCAGCAAAACTTTTTTCTTTGGGAACGAATTTGGCTGGTTGCATTACTCCTGGATCGAGTTGGGGACCCCAAGTGTCTCATTTCTAGTTGCTTTAGATACTGGAAGTGATCTTCTTTGGGTTCCATGTGATTGCATACAATGTGCTTCCTTAGCCGCGAGTTCCTACAGCAGTCTGGATAGAGATCTAAATGAATATAGCCCAACTAGTTCAAATTCCAGTAAGCATTTATCCTGCAGCCACCAGCTTTGCGAGTCCGGTTCGCATTGTAAAAGTCCCAAGCAGCCTTGCCCTTACACTATCAATTATTTATCAGAGAACACCTCCAGCTCCGGATTGCTAATTGAGGATATACTGCATCTTGCTTCTACAGGCAGTGATGCAGCTAAAACTTTTGTTCAGGCTCCAGTTGTTATAGGATGTGGCATGAAGCAAACTGGTGGTTATTTGGATGGGGTAGCTCCAGATGGTCTCATGGGATTGGGACTAGGGGTGACTTCAGTTCCCAGTCTCCTTGACAAAGCGGGCCTTGTCCCCAACTCATTCTCAATGTGCTTTGATAAAGATCAGTCTGGCAGAATATTTTTTGGGGACCAGGGATCAGCCAGTCAACAGTCCACTCCGCTCCTACCTTTAGATGGGATATATTCCACCTACATTGTCGGGGTAGATGCATGTTGTATACAGGAGTCCTGCATTGCAATGACAAATTTTGAGGCACTGGTTGATAGTGGGACATCATTTACATTTCTTCCAGCTCAAGTATACGAAACGATTGTCCAGGAGTTTGACAGACATGTAAATGCTTCACGCTCTAACTTTGAAAGATCTCTTTGGGAGTATTGCTATCAGTCCAGGACACCAGAATTACCCAAACTACCCTCCCTGACATTTACATTCCAGAAGAACAACCGGTTCGTGGTCAAGAGTCCCGTGATGAAGATATATGACAGCCAGGGCATTCTTGGATTTTGCTTAGCTATACAGCCGACGGATGGGGATATTGGGATAATTGGACAAAATTACATGATGGGTTACCGGCTGGTGTTTGATAGGAAGAATATGAGGTTGGCTTGGTCACACTCTGATTGTCGAGATTTCAATGTCGGCAATGGAACGCTCCTTGCTCCTCCTCCCAACGGGACACAACCAACTCCTTTACCTACTGAGCAGCAGAAAAACCCTGGCAAGCCTGCAGTGGCTCCTGCCGTTGCTGGTAGAACTCCCTCTAAACCATCAGCTGCTTCGACCCCAATTATCTCGTCCAGATTTTGTACGCTGATCTTGGTTCTGCTGTCTTTTCTACTTTTAGAAGGTATCTCAGGCTTTCCAGTGAGATGA 1623 0.4578 MATRSPCPFLWLRLVMALFFLLVKNEAMILYSSRLIHRFSDEMKSHLKVSKPASEDWPWPERNTMRYYEMLLNTDFERHKRKLGAHYQLLYPSRGSKTFFFGNEFGWLHYSWIELGTPSVSFLVALDTGSDLLWVPCDCIQCASLAASSYSSLDRDLNEYSPTSSNSSKHLSCSHQLCESGSHCKSPKQPCPYTINYLSENTSSSGLLIEDILHLASTGSDAAKTFVQAPVVIGCGMKQTGGYLDGVAPDGLMGLGLGVTSVPSLLDKAGLVPNSFSMCFDKDQSGRIFFGDQGSASQQSTPLLPLDGIYSTYIVGVDACCIQESCIAMTNFEALVDSGTSFTFLPAQVYETIVQEFDRHVNASRSNFERSLWEYCYQSRTPELPKLPSLTFTFQKNNRFVVKSPVMKIYDSQGILGFCLAIQPTDGDIGIIGQNYMMGYRLVFDRKNMRLAWSHSDCRDFNVGNGTLLAPPPNGTQPTPLPTEQQKNPGKPAVAPAVAGRTPSKPSAASTPIISSRFCTLILVLLSFLLLEGISGFPVR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00031 540 PANTHER ASPARTYL PROTEASES 22 451 IPR001461 GO:0004190|GO:0006508
Pte3g00031 540 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 124 135 IPR001969 GO:0004190|GO:0006508
Pte3g00031 540 Gene3D Acid Proteases 293 460 IPR021109 -
Pte3g00031 540 ProSiteProfiles Peptidase family A1 domain profile. 109 454 IPR033121 -
Pte3g00031 540 FunFam Aspartyl protease family protein 1 96 292 - -
Pte3g00031 540 Gene3D Acid Proteases 102 292 IPR021109 -
Pte3g00031 540 Pfam Xylanase inhibitor C-terminal 333 454 IPR032799 -
Pte3g00031 540 FunFam Aspartyl protease family protein 1 295 460 - -
Pte3g00031 540 PRINTS Pepsin (A1) aspartic protease family signature 430 445 IPR001461 GO:0004190|GO:0006508
Pte3g00031 540 PRINTS Pepsin (A1) aspartic protease family signature 115 135 IPR001461 GO:0004190|GO:0006508
Pte3g00031 540 PRINTS Pepsin (A1) aspartic protease family signature 334 345 IPR001461 GO:0004190|GO:0006508
Pte3g00031 540 MobiDBLite consensus disorder prediction 466 510 - -
Pte3g00031 540 Pfam Xylanase inhibitor N-terminal 112 292 IPR032861 -
Pte3g00031 540 SUPERFAMILY Acid proteases 105 458 IPR021109 -
Pte3g00031 540 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 334 345 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00031 Pte-Chr3 513631 518258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00031 102 461 Miscellaneous Gene Families AT1G44130 27.083 1.08e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00031 - - qsa:O6P43_030435 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00031 3 513631 518258 Pte3g00031 3 513631 518258 RCT