Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00004 ATGAATCCTCTGTGCTGCATTGCTCCCGTTTCGATCGATCGAGAGCGGGCTAACCCAGTTGTGGCCAAATCAACTACCGGTCACAGTCAGTCGGGCCTTGATGTGCCTGATAGAATCGTCGCTCATGGTTCCAAACCGAGCTTTTTAGCCCAGGTTTCGTCTGTCACCAATGCATCGGACAAGGCGTCATCTGTAGCTTTGAATCTGCATGAAGACGAAGATGGGATCCATGATGCAGCGACAGATTCTAAAGCATACAGTTTGAATGGTATGGGTGGTGGTGTGAGTGTTGCTGGGATTTTATACAAGTGGGTTAACTACGGTAAAGGTTGGAGGTCAAGGTGGTTTCTACTTGAAGACGGTGTTTTATCGTACTATAAGATTCATGGTCCTGACAAGATTTTGATGTCTCCTGCGAGAGATAAGAGTGTCAAGGTGATCGGAGACGAGTCATCGAAATACATGAGAAAAGCTAACTCGGGTGGCAGTGCTCGACCTGGACTTGGAGTTGCTGTCCAGCGGTATTGCAAGCCCTTGGGCGAGATACATTTAAAGGTTTCGTCAGTTCGTGCTAGCAAATCAGACGATAAAAGGCTTTCAATATTCACAGGGACTAAAACTCTTCACTTGCGATGTACATCAATGGAAGACAGAGCTTCTTGGATCGAGGCTTTGCTGTCTGCCAAGGATCGCTTTCCTAGATCTCTTTCAAGTAGTGATTTTGCAACTATTGAAGATGCTGCTGTTTCAACTGATAGGCTAAGATCACGGTTATCACAAGAAGGTGTAGGTGAAGAAGTGATTAAAGAATGTGAAACGATTGTGCTTTCAGAAGTCTCTCAGCTGCAAATTAAGCTAAAGGTTCTGAATCGTAAGCATGCTATTTTGTTGGACACCTTGAGGAGGTTGGAGACGGAAAAAATAGAGCTGGAAGCAACTGTAGTTGATGAAACAAAGGAACGCGAGTCATATTGTGGACAAGGAAATAGGAGATTCAGTGACTTCTATTCTGTGATTTCAGAGGGTAGCGCAACAGATTCTGTTGCAGATAATGAGAGCCAAGATGGCGCAGATGTTGAGACAGATGAAGATGAGAGAACATACTTTGACACAAGTGAATTCTTGTCTTCTGATGCTTTGAGAAGTGCTTCCTACCGAAGTAGAGAAGGGACAGGGAATAATCTAGTATCTGAGGGCGATTCTTTCTTTTCTGATCGTTTTCATGGAAAGGAGATTGAAATTATAAATTATCCTTATGTCAAACGAAGGGATAATTTACCAGAGCCAAAAGAAAAGGATAAGCCTATTGGTTTGTGGTCAATTATCAAGGACAATATTGGCAAGGATCTTTCTGGAGTTTGTCTTCCTGTTTATTTTAATGAACCGTTGTCATCATTGCAAAAGTGCTTTGAAGATTTGGAATACTCATCTTTGGTTGATAAAGCATTGGAATGGGGAAAGCAGGGGGATGACTTGATGAGAATACTAAATGTGGCTGCCTTTGCTGTGTCTGGTTATGCATCAACAGAAGGGCGTCAGTGTAAACCCTTTAATCCCCTCCTTGGTGAGACGTATGAAGCAGATTATCCAGATAAAGGACTTCGGTTTTTCTCTGAAAAGGTTAGTCATCATCCAATGGTCGTTGCATGTCACTGCCAGGGCAGAGGCTGGAAATTCTGGGCCGATTCTAATCTCAAGGGTAAATTCTGGGGCCGTTCAATTCAGCTAGATCCTGTAGGCATCCTCACTCTGCAATTTGAGGATGGTGAGACATTTCAGTGGAGCAAAGTCACCACATCCATATACAATATCATATTGGGTAAAATCTATTGTGATCATTATGGCACAATGCGCATCAAAGGCAGTGGCAATTATTCCTGCAAGCTCAAGTTCAAGGAGCAGTCTATCATAGACCGAAATCCACATCAGGTTCACGGGTTTGTTCAAGATAATGGAACTGGAGAAAAAGTAGCGATGCTTATTGGAAAGTGGGATGAGGCAATGTATTATGTGCTTGGAGATCCCACTACAAAGCCAAAGGGATATGATCCGATGACCGAAGCCATACTGCTGTGGGAAAGAGACAAGTCCACTACCAAGACTAGATACAACCTCTCCCGTTTTGCAATATCATTGAATGAAATAACCCCCGGTTTATTGGAGAAGTTACCTCCTACCGACTCAAGGTTGAGGCCAGACCAAAGATATTTAGAGAACGGAGAGTACGAGTTGGCAAATATCGAGAAGCTCAGACTAGAGCAGTTGCAAAGACAGGCAAGGAAAATGCAGGAGAGAGGATGGCAACCCAGATGGTTCCAAAAGGACGAAGATGGTTGTTACAGATATAAAGGTGGATACTGGGAAACGAGAGAGAGAAAGAACTGGGATGGAATTCCCGACATATTTGGCCAGAGTTATGCTTTGCCTTCTTTTTCAATTGAAGATTAA 2448 0.4338 MNPLCCIAPVSIDRERANPVVAKSTTGHSQSGLDVPDRIVAHGSKPSFLAQVSSVTNASDKASSVALNLHEDEDGIHDAATDSKAYSLNGMGGGVSVAGILYKWVNYGKGWRSRWFLLEDGVLSYYKIHGPDKILMSPARDKSVKVIGDESSKYMRKANSGGSARPGLGVAVQRYCKPLGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRCTSMEDRASWIEALLSAKDRFPRSLSSSDFATIEDAAVSTDRLRSRLSQEGVGEEVIKECETIVLSEVSQLQIKLKVLNRKHAILLDTLRRLETEKIELEATVVDETKERESYCGQGNRRFSDFYSVISEGSATDSVADNESQDGADVETDEDERTYFDTSEFLSSDALRSASYRSREGTGNNLVSEGDSFFSDRFHGKEIEIINYPYVKRRDNLPEPKEKDKPIGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSSLVDKALEWGKQGDDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCQGRGWKFWADSNLKGKFWGRSIQLDPVGILTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNGTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAILLWERDKSTTKTRYNLSRFAISLNEITPGLLEKLPPTDSRLRPDQRYLENGEYELANIEKLRLEQLQRQARKMQERGWQPRWFQKDEDGCYRYKGGYWETRERKNWDGIPDIFGQSYALPSFSIED* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00004 815 SMART PH_update 95 232 IPR001849 -
Pte3g00004 815 Gene3D - 523 689 - -
Pte3g00004 815 ProSiteProfiles PH domain profile. 94 230 IPR001849 -
Pte3g00004 815 Coils Coil 745 765 - -
Pte3g00004 815 CDD PH_ORP_plant 97 234 - -
Pte3g00004 815 SUPERFAMILY PH domain-like 91 236 - -
Pte3g00004 815 MobiDBLite consensus disorder prediction 344 363 - -
Pte3g00004 815 Coils Coil 286 320 - -
Pte3g00004 815 Pfam Oxysterol-binding protein 438 791 IPR000648 GO:0008289
Pte3g00004 815 FunFam Oxysterol-binding protein-related protein 2A 734 804 - -
Pte3g00004 815 FunFam oxysterol-binding protein-related protein 1D isoform X1 523 696 - -
Pte3g00004 815 SUPERFAMILY Oxysterol-binding protein-like 433 803 IPR037239 -
Pte3g00004 815 Gene3D - 94 232 IPR011993 -
Pte3g00004 815 Gene3D - 734 797 - -
Pte3g00004 815 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 97 790 IPR000648 GO:0008289
Pte3g00004 815 Pfam Pleckstrin homology domain 99 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00004 Pte-Chr3 203679 210091 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00004 K20456 - csav:115712754 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00004 3 203679 210091 Pte3g00004 3 203679 210091 RCT