Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02518 ATGCCATTTGAAATAATGGATCAACGGGGCATGTCTGCGTCTTCGCATTTTGAAGATGTTCGTTTCTGCTCGGAGAGGAATGGATCGTGGAAACCAAGAAATATGCATGATCTCCCAGGAACTGCTAGAATGGGAGCATCCCCTGGAGGCATGTCACCCAGAGGCATTTTTGACACTTCATCACCTGCTGGGTGGACAGACTTGCAGCCACCACAGATAAATCCACCGAGAGAGCTTACTGAGAAGCAATTTCTAGGTGGAGAAGATGGTTTTAGAAATACCCTCAAGCCTGCAAATAACTCTTTGCTTCATCATTTGAAACCATGGTCAAATGGAATGACACCAACAACTTCGTCTTCTTATGGTTTGGGGGGAACAAAGATCATTACTGATGCTGGCTCTCATGAGAGCAGCCTATTCTCAAGTTCCCTGTCAGAGATATTTACTAGTAAAATGAGGTTGTCAGCAAATGATGTTCTATCTCATCAGCCAGCACGCACAATTGTTTCAAGCAATGAGGAAGAGTCATGTGGATATCATAGGAAAAATGAGGCTGAACACATTGGGAATCTCCTACCGGATGAAGATGATTTGTTTTCTGGTGTTATTGACGATTTGGGATGTAATACAGACGCCAACACAGGGACTGAATTGGATGATTTCGATTTGTTTAGCAGTGGTGGTGGTTTGGAGTTGGATGAGGACAGTGTTTTGGTTTCAGACAAGCGAAGAAGGGATTTTGGTGGACAGAATTGTCTAGGTTGTATGAGTGGAAAGTTTCAGTTAGGCGAACATCTTTCTAGAACTCTTACCGTGAGAAATATTGATAGCAGTATTGAAGACTCAGAAGTTACAGTTTTGTTTGAGCAATTTGGAGATATAAGAACCCTTTATACAGCATGCAAGCACCATGGTTTTGTTATGGTTTCATATTATGACCTAAGGGCATCCCAAAATGCAATGAGAGTACTTCAAAACAAACCATTGAGGCATAGGAAACTCGATATACATTATTCAATGCCGAAGGAAAATTGTCCAGAGAAGGACATTAACCATGGTATACTCTCTGTATCTGATCTTGATCGTTCTGTTTCAAATGATGAGCTTCAACATATTTTTGGTTTTTATGGAGAAATCAAATATATCTATGACATTTCAGAAAAGCATCAAGTGAAATTTATAGAGTTTTATGATGTGCGTGCTTCGAATTCTGCTCTTGAGGCATTAAGTGACAGTAAAATTGCTGGCAGGCAGATTAAGCTTGAACTATGCAGTACGGAGGATGCTACGAAGTGCCTGATGCAACACTCTCAGAGGAGAAATGGTGGACATAATATGGCAGCAACTTCAGGAGCAACCGCACCCATATGTTTGGATACTGGACATCAGGGATTGTATTCTTCAATGGGACAGATTATGAGTGCATATACAGGGAGTTCACTTCCTGACTGTAATAGGAAAACTAGCTTGGCAAACACATTACCCACCCCAGTGGCAAGGTCATCTGCTGAGAAACCAGTTGGCGTCAGCGAGACTAGCTGCTTTGTTGATGGAGTGAAAACTACATCTTTTTCAAGATTTCATACTCATTCCTTGCCAGAGCATGATAATGTACCCAATGGTTTTATCAGCAACTCTTCGAGCAATACTATGAATTTTGCTTGCAATATTGGGTCCAGATCAGCAGAAGGTGTTGACGGGTTCGTATCTCCTGGAAATGGCAACTACCTACCTCAGGGACTTCATTACATGTGGAACAAATCCAATCTGCATCAGCAACACCCTAGACACATGATGTGGCAGAATTCACCTCCATTTGTGCATGGTGCCTGTGCTCCCCGCCTTCCCCAAATGTCTGGGTTTCCTAGAGTGCCACCTCATATACTTAGAGCGTCACACATAGATCACCATGTTGGATCAGCACCAGTTGTTAATAGCGCCCCCTGGGACAGGCGACTGAACCATCTAGGAGAGTCTCCTGAAGGTTCTACCATTCACTTAGGTTCTCTAGGGAATGCAGGTTTTCCTGGTACATGGCAAATGAATCCTACAAATATGTCACCTCAGAACATGTTTTCTCATGTTGGTGGGAACTACATGGACATGACAAAAAATCCTGGACAAAGCTCTTCTAAACAGATTTGCCGTGTTTTCCCCGGGAGGAATCCTATGATGTCCATGTCTAAGCATGATGCTTCAAGTGAACATTCTAGAAACATGTATCATCGCAGAGGCGATTCAAATTCAAGTAATGCTGACAAGAAACAATTTGAACTAGATATTGAGCGCATCGTTCGTGGGGAAGACAGCCGAACAACGCTCATGATAAAGAATATCCCTAACAAGTACACTTCAAAAATGCTTCTTGCAGCCATAGATGAGCAATGCCGGGGAACATATGATTTTATTTATCTACCTATTGACTTTAAGAACAAATGCAATGTTGGCTATGCATTCATCAACATGACTGATCCAAGTCAGATACTTCCATTTTACCAGGCATTTAACGGGAAGAAGTGGGAGAAGTTCAACAGTGAAAAAGTAGCCTCTCTTGCTTATGCAAGGATTCAGGGCAAAGCTGCACTTATTGCCCACTTTCAGAATTCAAGCTTGATGAATGAAGATAAGCGGTGCCGGCCTATTCTTTTCCACACAGATGGTCCAAATGCTGGGGATCCGGAGCCATTCCCAATGGGGGCAAACATCAGACCCAGACCAGGAAAATATCGTTCCTCTGCCAACGAGGATTATCTTATCCAAGGGAACCCTTCAACCTCAACAGGTGGAGATAAGTCTCCAAATGCAATGGCTTCTTCAGTGGCTTCTGACTCACTGTGCCTTGGATAA 2847 0.4282 MPFEIMDQRGMSASSHFEDVRFCSERNGSWKPRNMHDLPGTARMGASPGGMSPRGIFDTSSPAGWTDLQPPQINPPRELTEKQFLGGEDGFRNTLKPANNSLLHHLKPWSNGMTPTTSSSYGLGGTKIITDAGSHESSLFSSSLSEIFTSKMRLSANDVLSHQPARTIVSSNEEESCGYHRKNEAEHIGNLLPDEDDLFSGVIDDLGCNTDANTGTELDDFDLFSSGGGLELDEDSVLVSDKRRRDFGGQNCLGCMSGKFQLGEHLSRTLTVRNIDSSIEDSEVTVLFEQFGDIRTLYTACKHHGFVMVSYYDLRASQNAMRVLQNKPLRHRKLDIHYSMPKENCPEKDINHGILSVSDLDRSVSNDELQHIFGFYGEIKYIYDISEKHQVKFIEFYDVRASNSALEALSDSKIAGRQIKLELCSTEDATKCLMQHSQRRNGGHNMAATSGATAPICLDTGHQGLYSSMGQIMSAYTGSSLPDCNRKTSLANTLPTPVARSSAEKPVGVSETSCFVDGVKTTSFSRFHTHSLPEHDNVPNGFISNSSSNTMNFACNIGSRSAEGVDGFVSPGNGNYLPQGLHYMWNKSNLHQQHPRHMMWQNSPPFVHGACAPRLPQMSGFPRVPPHILRASHIDHHVGSAPVVNSAPWDRRLNHLGESPEGSTIHLGSLGNAGFPGTWQMNPTNMSPQNMFSHVGGNYMDMTKNPGQSSSKQICRVFPGRNPMMSMSKHDASSEHSRNMYHRRGDSNSSNADKKQFELDIERIVRGEDSRTTLMIKNIPNKYTSKMLLAAIDEQCRGTYDFIYLPIDFKNKCNVGYAFINMTDPSQILPFYQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMGANIRPRPGKYRSSANEDYLIQGNPSTSTGGDKSPNAMASSVASDSLCLG* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02518 948 SUPERFAMILY RNA-binding domain, RBD 267 428 IPR035979 GO:0003676
Pte2g02518 948 Gene3D - 352 445 IPR012677 -
Pte2g02518 948 Pfam RNA recognition motif 2 771 867 IPR007201 -
Pte2g02518 948 MobiDBLite consensus disorder prediction 727 754 - -
Pte2g02518 948 CDD RRM1_MEI2_like 267 343 IPR034453 -
Pte2g02518 948 SMART rrm1_1 773 849 IPR000504 GO:0003723
Pte2g02518 948 SMART rrm1_1 269 337 IPR000504 GO:0003723
Pte2g02518 948 SMART rrm1_1 354 422 IPR000504 GO:0003723
Pte2g02518 948 Gene3D - 721 859 IPR012677 -
Pte2g02518 948 MobiDBLite consensus disorder prediction 886 948 - -
Pte2g02518 948 PANTHER RNA RECOGNITION MOTIF-CONTAINING 120 937 - -
Pte2g02518 948 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 353 426 IPR000504 GO:0003723
Pte2g02518 948 SUPERFAMILY RNA-binding domain, RBD 773 858 IPR035979 GO:0003676
Pte2g02518 948 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 356 420 IPR000504 GO:0003723
Pte2g02518 948 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 270 334 IPR000504 GO:0003723
Pte2g02518 948 CDD RRM3_MEI2_like 774 859 IPR034454 -
Pte2g02518 948 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 268 341 IPR000504 GO:0003723
Pte2g02518 948 Gene3D - 261 351 IPR012677 -
Pte2g02518 948 MobiDBLite consensus disorder prediction 731 754 - -
Pte2g02518 948 FunFam Protein MEI2-like 1 259 350 - -
Pte2g02518 948 MobiDBLite consensus disorder prediction 915 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02518 Pte-Chr2 44349667 44357332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02518 - - qsa:O6P43_030654 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02518 2 44349667 44357332 Pte2g02518 2 44349667 44357332 RCT