Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02428 ATGAAGATCTTTTTCTTGCATGTTCTCTTACTGGCTTTTGTTTTTGGAGCAGCTAGGAGCTTTGAATTCCATGACAAAGATTTAGCATCCGAAGGAAGTTTGCGGGACTTGTATGAACGATGGAGGAGCCAATATACGGTGTCGCGAAATCTTGCTGACAAACACAGTCGCTTCAATGTTTTCAAACAGAACGTCATGCATGTTCACAACGCTAACAAGATGGATAAGCCATACAAGCTGAAACTAAACAAGTTTGCAGACATGACGAACCACGAGTTTAGGACTACTTACGCAGGCTCCAAGGTTAACCATCATAGAATGTTTCGTGGAACAAACACAGGTAATGCAAGCTTCATGTATGAGAAGGTTGATGGTGTGCCCCCATCTGTAGATTGGAGGACCAAAGGTGCAGTAACCGCTATTAAGGATCAAGGGCAATGCGGGAGTTGCTGGGCATTTTCAACAGTTGCAGCAGTCGAAGGTATCAATCAGCTTAAGACAAAGAAGCTAGTTTCACTATCTGAGCAAGAGTTGGTGGATTGTGACACGGCGCAAAACCAAGGATGCAATGGTGGTCTAATGGAATATGCGTTTGAATTTATCAAGAGCAAGGGTGGTATAACAACAGAAAGTAATTACCCTTATCTCGCAAAAGATGGAAGTTGCGATGCCTCAAAGGAGAACGAGCCCGCAGTGTCAATTGATGGCCATGAAACTGTTCCAGCTAATAATGAAGATGCACTACTTAAAGCAGTTGCAAACCAACCTGTATCAGTGGCCATAGATGCTGGAGGATATGATTTCCAGTTTTACTCAGAGGGAGTATTTACTGGAGAGTGTGGCACTGATCTAGATCATGGCGTCGCAATTGTGGGTTATGGAACAACTCTTGATGGAACCAAATATTGGATAGTGAAAAACTCCTGGGGAACAGAATGGGGAGAAAAGGGATACATAAGGATGCAGCGTGGCATATCCTGTAAGGAGGGTGTTTGTGGTATTGCAATGGAGGCTTCATATCCTATTAAGAACTCCTCCACCAACCCAACGGGGAGCTCGCCAAATCAGAAGGATGAACTCTAA 1083 0.4395 MKIFFLHVLLLAFVFGAARSFEFHDKDLASEGSLRDLYERWRSQYTVSRNLADKHSRFNVFKQNVMHVHNANKMDKPYKLKLNKFADMTNHEFRTTYAGSKVNHHRMFRGTNTGNASFMYEKVDGVPPSVDWRTKGAVTAIKDQGQCGSCWAFSTVAAVEGINQLKTKKLVSLSEQELVDCDTAQNQGCNGGLMEYAFEFIKSKGGITTESNYPYLAKDGSCDASKENEPAVSIDGHETVPANNEDALLKAVANQPVSVAIDAGGYDFQFYSEGVFTGECGTDLDHGVAIVGYGTTLDGTKYWIVKNSWGTEWGEKGYIRMQRGISCKEGVCGIAMEASYPIKNSSTNPTGSSPNQKDEL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02428 360 Gene3D Cysteine proteinases 13 344 - -
Pte2g02428 360 FunFam Senescence-specific cysteine protease SAG39 18 343 - -
Pte2g02428 360 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Pte2g02428 360 PRINTS Papain cysteine protease (C1) family signature 302 308 IPR000668 GO:0006508|GO:0008234
Pte2g02428 360 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Pte2g02428 360 SUPERFAMILY Cysteine proteinases 34 343 IPR038765 -
Pte2g02428 360 Pfam Cathepsin propeptide inhibitor domain (I29) 38 93 IPR013201 -
Pte2g02428 360 CDD Peptidase_C1A 127 341 IPR039417 -
Pte2g02428 360 SMART Inhibitor_I29_2 38 93 IPR013201 -
Pte2g02428 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 302 321 IPR025661 -
Pte2g02428 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Pte2g02428 360 Pfam Papain family cysteine protease 126 342 IPR000668 GO:0006508|GO:0008234
Pte2g02428 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Pte2g02428 360 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 340 IPR013128 GO:0008234
Pte2g02428 360 SMART pept_c1 126 342 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02428 Pte-Chr2 43711490 43714378 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02428 K16292 - jre:108980473 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02428 2 43711490 43714378 Pte2g02428 2 43711490 43714378 RCT