Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02371 ATGTGTTCTCCAAGCAAAAGAAGAGAAATGGATGTGATGAAATTGATGATGAGTGATTATACTGTGGAGACGATAAATGATGGACTCAATGAATTTAATGTGGAATTCCAGGGTCCAAAAGAAAGCCTTTATGAAGGTGGCTTTTGGAAGATCCGTGTGGAGCTTCCTGATGCCTACCCGTACAAATCACCTTCCGTTGGATTTGTAAACAAGATATTTCACCCAAATGTTGATGAGCTATCCGGTTCGGTATGCTTGGATGTTATCAACCAATCATGGAGTCCGATGTTTGATCTTCTAAACGTCTTTGAAGTTTTCCTTCCACAACTCTTGCTTTATCCGAATCCTTCAGATCCTCTTAATGGTGATGCAGCATCATTGATGCTGAAGGATCGAAAGCTGTATGATCAGAAAGTTAAAGAGTATTGTGAGCGTTACGCAAAGAAGGAGCACATTTCCAAATCAGCTGCTGAGGATAACAGCGATGATGAGGAAGATATCAGTGAAGAAGATTGCGGTTCCAGTGATGACGACATTGCAGGCCATGCTGACCCCTGA 558 0.4194 MCSPSKRREMDVMKLMMSDYTVETINDGLNEFNVEFQGPKESLYEGGFWKIRVELPDAYPYKSPSVGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMLKDRKLYDQKVKEYCERYAKKEHISKSAAEDNSDDEEDISEEDCGSSDDDIAGHADP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02371 185 SMART ubc_7 4 148 - -
Pte2g02371 185 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
Pte2g02371 185 Pfam Ubiquitin-conjugating enzyme 11 142 IPR000608 -
Pte2g02371 185 SUPERFAMILY UBC-like 3 150 IPR016135 -
Pte2g02371 185 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Pte2g02371 185 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 3 148 IPR000608 -
Pte2g02371 185 CDD UBCc 7 143 IPR000608 -
Pte2g02371 185 FunFam Ubiquitin-conjugating enzyme 5, E2 1 159 - -
Pte2g02371 185 MobiDBLite consensus disorder prediction 152 185 - -
Pte2g02371 185 MobiDBLite consensus disorder prediction 159 174 - -
Pte2g02371 185 Gene3D Ubiquitin Conjugating Enzyme 2 163 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02371 Pte-Chr2 43282863 43286796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02371 3 115 Miscellaneous Gene Families AT3G17000 23.967 8.03e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02371 K10576 - zju:107418449 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02371 2 43282863 43286796 Pte2g02371 2 43282863 43286796 RCT