Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02369 ATGGCTTCGAGTGCTTCAAGATTCATCAAGTGCGTGACTGTTGGAGATGGCGCTGTTGGAAAGACCTGCATGCTTATTTGTTATACCAGCAACAAATTTCCTACGGATTACATTCCCACGGTGTTTGATAACTTCAGCGCAAATGTTGTGGTTGACGGCATGACCGTCAATTTAGGACTCTGGGACACAGCTGGACAAGAAGATTACAATAGATTAAGGCCTTTGAGCTATAGAGGTGCAGATGTCTTTGTACTGGCTTTCTCATTGGTCAGTCGTGCAAGCTACGAGAATGTGTTGAAAAAGTGGATCCCAGAACTTCAGCATTATGCCCCTAGTATCCCGTTGGTACTAGTAGGAACAAAATTGGATCTTCGTGAGGACAAACATTATCTGGCTGACCATCCTGGTCTTGTTCCCGTGACCTCTGCACAGGGTGAGGAACTCAGGAAACAGATTGGAGCTGCGTATTACATAGAATGCAGCTCAAAAACTCAGCAGGTAACCCGAACATGCCACTATTTTATTCTATCAATGGGATTAAATACTTGTACCTTACGCTTTCATTGTGAAAAACCTTCATTTTCTGCCAAAAATTGA 597 0.4338 MASSASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDGMTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYAPSIPLVLVGTKLDLREDKHYLADHPGLVPVTSAQGEELRKQIGAAYYIECSSKTQQVTRTCHYFILSMGLNTCTLRFHCEKPSFSAKN* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02369 198 Pfam Ras family 10 168 IPR001806 GO:0003924|GO:0005525
Pte2g02369 198 ProSiteProfiles small GTPase Rab1 family profile. 4 198 - -
Pte2g02369 198 SMART ras_sub_4 6 181 - -
Pte2g02369 198 SMART rab_sub_5 9 182 - -
Pte2g02369 198 NCBIfam small GTP-binding protein domain 9 130 IPR005225 GO:0005525
Pte2g02369 198 ProSiteProfiles small GTPase Rho family profile. 2 189 - -
Pte2g02369 198 SMART rho_sub_3 11 174 IPR001806 GO:0003924|GO:0005525
Pte2g02369 198 PANTHER RHO FAMILY GTPASE 6 172 IPR003578 GO:0005525|GO:0007264
Pte2g02369 198 PRINTS Transforming protein P21 ras signature 9 30 - -
Pte2g02369 198 PRINTS Transforming protein P21 ras signature 111 124 - -
Pte2g02369 198 PRINTS Transforming protein P21 ras signature 157 179 - -
Pte2g02369 198 PRINTS Transforming protein P21 ras signature 49 71 - -
Pte2g02369 198 PRINTS Transforming protein P21 ras signature 32 48 - -
Pte2g02369 198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 166 IPR027417 -
Pte2g02369 198 CDD Rop_like 8 169 - -
Pte2g02369 198 Gene3D - 2 181 IPR027417 -
Pte2g02369 198 ProSiteProfiles small GTPase Ras family profile. 4 198 IPR001806 GO:0003924|GO:0005525
Pte2g02369 198 FunFam Rho family GTPase 6 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02369 Pte-Chr2 43275362 43278328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g02369 9 174 EF-hand Containing Proteins AT5G27540 24.551 8.03e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02369 K04392 - zju:107418460 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02369 2 43275362 43278328 Pte2g02369 2 43275362 43278328 RCT