Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02358 ATGGTTTCCGATTCGATCACCGCCGCTTTGATTCCTTCAGCTGCTGATAACACCAACAAGAATTTCTGCAAGAAGAAGAGGGCCAACAGGTCCGCGAAGCTGAAGCAGTGCAAGTTTGATGCACGTCGGGAGCAATGGCTTTCTCAAGTCGCTGTCAAGAATAAAGGGCGCAAGGAAGGTGGGGAGAATGTTCACACATCGCCAATTCCTGCGAGGAAAGAAAGCAAACATTCACTTGAGAAATTGGAGATGGTGACGCCTACAGATGAAGAGAATAGTGGATCGATTCATCAAGACAGTGATTTGGAGTTTCTCTCTAACAGTTCTATTAGTTTTCATAGTAGTGTCTTGGGAGGGAATGATTCTGGGACCAATTTCACTGGGACTAGCAGCAGCAGCAGCAGCAGCAGCAGTGGTGGGTACTGCTCTGGGAATATTACAGAAGAAGAAGAATGTGACGATGATGATGGATGTTTGGATGATTGGGAGGCTGTGGCTGATGCTTTAGCCGCCAATGACAAGCATCAAAATCGGTGTCCCAAGTCTGTCCCTTTGGCTTTGCGCGATCCTACTGCTCAAACGGTTCCCACTTGTGATTCAAGTAATCGGCCAGTCTCAGGAATGGAGAATTCAAAGCCCGAGACTGCAAGATCGATTCGAAGATCCTCTGTGAGTAGTTGTCGAGCATGGAGGCCAGATGATGCTTTTCGCCCTCAGAGTTTACCGAATCTATCTAAGCAATACAGTTTACCTAATCCTGAACGGCATCATGGAGGAGGGGTACCGTGGGCTTCTAATCCAGTTATCATTGCACCATCTTCGTGCCCTATATGCTGCGAGGATTTAGATTCGACAGACTCGAGCTTTTTACCATGTTTGTGTGGGTTCCGGCTCTGTCTTTTCTGCCACAAGACGATTCTTGAAGCGGATGGACGTTGTCCGGGATGCAGGAAACCGTATGAGCAACATCTAGTTGAGACAGAGACAAGTGTGCATGGTGGCAGCTTGACTCTCCGGCTGGCTCGTTCCTGCAGCTTGATCGAAAGTCCATACTGGTGGCAAAGGTCAATCTTTCAGTTTTCTGTCAACCTTTGA 1095 0.4795 MVSDSITAALIPSAADNTNKNFCKKKRANRSAKLKQCKFDARREQWLSQVAVKNKGRKEGGENVHTSPIPARKESKHSLEKLEMVTPTDEENSGSIHQDSDLEFLSNSSISFHSSVLGGNDSGTNFTGTSSSSSSSSSGGYCSGNITEEEECDDDDGCLDDWEAVADALAANDKHQNRCPKSVPLALRDPTAQTVPTCDSSNRPVSGMENSKPETARSIRRSSVSSCRAWRPDDAFRPQSLPNLSKQYSLPNPERHHGGGVPWASNPVIIAPSSCPICCEDLDSTDSSFLPCLCGFRLCLFCHKTILEADGRCPGCRKPYEQHLVETETSVHGGSLTLRLARSCSLIESPYWWQRSIFQFSVNL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02358 364 SUPERFAMILY RING/U-box 273 323 - -
Pte2g02358 364 MobiDBLite consensus disorder prediction 126 147 - -
Pte2g02358 364 CDD mRING-HC-C4C4_CNOT4 274 318 IPR039515 -
Pte2g02358 364 MobiDBLite consensus disorder prediction 192 225 - -
Pte2g02358 364 MobiDBLite consensus disorder prediction 237 256 - -
Pte2g02358 364 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 271 346 IPR039780 GO:0004842|GO:0030014
Pte2g02358 364 FunFam RING/U-box superfamily protein 268 333 - -
Pte2g02358 364 ProSiteProfiles Zinc finger RING-type profile. 275 317 IPR001841 -
Pte2g02358 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 332 IPR013083 -
Pte2g02358 364 Pfam RING/Ubox like zinc-binding domain 275 321 - -
Pte2g02358 364 MobiDBLite consensus disorder prediction 193 225 - -
Pte2g02358 364 MobiDBLite consensus disorder prediction 126 144 - -
Pte2g02358 364 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02358 Pte-Chr2 43173492 43176970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02358 - - qsa:O6P43_030922 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02358 2 43173492 43176970 Pte2g02358 2 43173492 43176970 RCT