Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g02278 ATGATACTCGGTGAAGACAAGATGGCAGTTGAAAAGCATCACAAGAGTCGTCTTGCTAATGGTAATGGTGGCGAAGCTGAAAACAGTCTTGCCAAACAGACTGACAAAGCTCCCTCTCAAAGTTCCGACTCAAGGTTTGGAAAATTGACTTCTGATAAAAACTCTGCGGAAATTTCGGACTATCTTGAAGCTGAGACTCAGACTCAGACTGATGAGTTACGTAAGAAGGCTAGGCACCAGAAAGAGATCACGTTGGAAGATATGTATTATAATCAAAACATGTTTGATGACGACGATGATGATAGTGACTGGGAGCCCATACTCAAGAGTGTGGAAATTGCAAAGTGGTTCTGCACCAATTGCACGATGGTTAACCTTGACGATGTCCTTTACTGCGATATATGTGGGGAGCATAAAGAATCTGGAATTCTGAAGCATGGATTTCTGGCATCTCCATTTGAATCAGATCTTATTGGGACTCCAGTTGAGACAGAAATGAAAGAAAGACGAAATGTTGTTGGGTTGCAAGGATCACCCCCTAATTGTGGCACAGCAATTGGATTTGATGAGAGGATGTTGTTACATTTGGAGGTTGAAAGAAAGTCACATCCACATCCTGAAAGACCAGACCGTCTTCGAGCTATTGCAGCCAGTCTTGCTACAGCTGGCATTTTTCCCGGACAGTGCCAACCAATATCTGCTAGAGAAATCACTAGAGAAGAGCTGCAGAAGGTCCACACACCAGAGCAAATTGAATCCGTTGAAGTTACAAGCCAGATGATCTCTAGCTATTTTACACCTGACACATATGCCAATGAGCATTCAGCACTTGCTGCTCGGATTGCAGCTGGTTTGTGTGCTGATCTAGCAAGGGAAATAGTTTCTGGACATTACAAAAATGGTTTTGCTCTGGTCCGCCCTCCTGGTCATCATGCTGGTGTGAGACAGTCCATGGGGTTCTGTCTGCACAATAATGCAGCAATAGCTGCATTAGCAGCTCAGAGTGTGGGTGCCAAGAAAGTTCTGATTGTTGATTGGGATGTACATCATGGCAATGGCACTCAGGAAATTTTTGATAAGAACAAATCGGTGTTGTACATTTCTTTGCATAGACATGAGGGAGGAAAGTTCTATCCCGGTACTGGAGCTGCTGATGAGGTTGGAACCAAGGGTGCAGAAGGTTACTGTGTCAATATTCCATGGAATCGTGGAGGAGTTGGTGATAATGATTATATATTTGCCTTTCAGCATGTCGTTTTACCTATAGCTTCTGAGTTCTCTCCTGATTTTACCATTATATCAGCGGGTTTTGATGCTGCAAGGGGTGATCCTTTAGGATGCTGTGATGTCACTCCCAGTGGTTATGCACAGATGACACAAATGTTAAGTACCCTCTCCGATGGGAAGTTGCTTGTCATTCTCGAGGGCGGCTACAATCTCCGTTCCATATCAGCATCAGCATCCACTGTGATTAAGGAGCTGCTTGGAGAAAGTTCTGGACGTAAACTTGAGAATGTTTTACCTTCCAGGGGTGGCTTGCAAACAGTTATGGAAGTGATCAAGATTCAGATGAAATACTGGCCTAGCATGGGAACAAGTTTCGCAAATTTATTGTCATTGTGGGAAATGTTCTCTGTTCAGAAAAAAAGGAAACGTATTGACAGAAAGCGCCGCCCCATCCTGGCTCCAGTTTGTTGGAAATGGGGACGTAAAAGTCTGCTATACAGCTTCCTATATGGCCATCGTGTTACAAAATTGACCAGGAGGTTTTATGTACCATAG 1782 0.4388 MILGEDKMAVEKHHKSRLANGNGGEAENSLAKQTDKAPSQSSDSRFGKLTSDKNSAEISDYLEAETQTQTDELRKKARHQKEITLEDMYYNQNMFDDDDDDSDWEPILKSVEIAKWFCTNCTMVNLDDVLYCDICGEHKESGILKHGFLASPFESDLIGTPVETEMKERRNVVGLQGSPPNCGTAIGFDERMLLHLEVERKSHPHPERPDRLRAIAASLATAGIFPGQCQPISAREITREELQKVHTPEQIESVEVTSQMISSYFTPDTYANEHSALAARIAAGLCADLAREIVSGHYKNGFALVRPPGHHAGVRQSMGFCLHNNAAIAALAAQSVGAKKVLIVDWDVHHGNGTQEIFDKNKSVLYISLHRHEGGKFYPGTGAADEVGTKGAEGYCVNIPWNRGGVGDNDYIFAFQHVVLPIASEFSPDFTIISAGFDAARGDPLGCCDVTPSGYAQMTQMLSTLSDGKLLVILEGGYNLRSISASASTVIKELLGESSGRKLENVLPSRGGLQTVMEVIKIQMKYWPSMGTSFANLLSLWEMFSVQKKRKRIDRKRRPILAPVCWKWGRKSLLYSFLYGHRVTKLTRRFYVP* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g02278 593 SUPERFAMILY Arginase/deacetylase 181 529 IPR023696 -
Pte2g02278 593 MobiDBLite consensus disorder prediction 1 52 - -
Pte2g02278 593 MobiDBLite consensus disorder prediction 1 20 - -
Pte2g02278 593 Gene3D Histone deacetylase domain 181 533 IPR037138 -
Pte2g02278 593 PANTHER HISTONE DEACETYLASE 9-RELATED 36 536 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Pte2g02278 593 Pfam Histone deacetylase domain 205 493 IPR023801 -
Pte2g02278 593 FunFam Histone deacetylase 15 178 557 - -
Pte2g02278 593 PRINTS Histone deacetylase superfamily signature 307 330 IPR000286 -
Pte2g02278 593 PRINTS Histone deacetylase superfamily signature 340 355 IPR000286 -
Pte2g02278 593 PRINTS Histone deacetylase superfamily signature 428 438 IPR000286 -
Pte2g02278 593 CDD HDAC_classII 205 495 - -
Pte2g02278 593 ProSitePatterns Zinc finger RanBP2-type signature. 116 135 IPR001876 -
Pte2g02278 593 MobiDBLite consensus disorder prediction 22 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g02278 Pte-Chr2 42447261 42454518 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g02278 - - qsu:112024699 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g02278 2 42447261 42454518 Pte2g02278 2 42447261 42454518 RCT