Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01740 ATGGGAAAGCGAAGTGAAAAGAAAAAGAAAAACCTGCGCGACGGTTATGGTGATGATACTGGAAGCCCAAGAAAGACCGGAGAGAATAGTCCCAAAGAATATGACAGTGATACGCTGGCTTTCATCTCTATGGCCCAAGAGTTAAAAGATGAAGGAAACAAGCTTTTCCAGAAGAGGGACCAGGAAGGAGCTATACTTAAGTATGAAAAAGCTATCAAATTGCTTCCGAAAAACCACATTGATGTCTCCCATATCCGAAGTAATATAGCTGCATGCTACATGCAGATGGGAATTAGTGAGTACCCAAAGGCAATTCGTGAGTGTAATGCAGCTATGGCAGTTACACCAAAGTACAGTAAGGCATTATTGAAGAGAGCAAGATGTTACGAGGGTTTAAATAGACTTGATTTAGCTTTCAGGGATGTTAGTGCTGTTGTAAACATGGAGCCGCATAATGTAACGGCTTTAGAGATTCGAGAAAGGGTGAAAGCAGCACTAGAGAGTAGAGGATTAAAGGTAACTGATTCTGTAATTGAGTTGCCTTCTGATTATGTTGAACCCCCTTATGCTTTGCCTCCAGCTAAAGTAGTGAAAGATAAGCGACGCAAGAAGAAGAGCAGCAAAGCTAAGGAAAGTAAAATTAATAGCAGAACTGAGGGCGAGAAGGCTGATGACGAGTTTGAAGAGATGGCAGCCCAAGACAGAAATGAAGAAAGGGCTGTGAACGAATTTGAAGATTATGAGACAGCAGAAAAGCCTGATGAGAAAAAGGATGATGAAGTCAAGGAAGTCGTAGAAGAGAAAATTAGTACTAAAAGGGAGGATATACCTATGAGAACTGTCAAATTATTCTTCGGGGAAGATATAAGATGCGCTCAGTTGCCTGTTAATTGCAGTCTTCTTCAGCTCCGGCAGCTTATCCGTGATCGTTTCCCAAGCTCAAATGCAGTTCTTGTTAAATACCAGGACAACGAAGGTGATTTAGTTAGTATTACTGCTGATGAGGATCTAAGATTGGCTGAAGTCTCGTCACTATCACAGAATTCTCTCCGGTTATATGTAGTTGGAGTTCATCCTGACCATGACCCCTATTTTGTGAAGCTGAATAATGAAAAGGAGGTTCGCAGCCCAGGAATTCATGATGTGCCTAAGAAAGGTTGTATAGTAAAAGAAAAGGAAGTGAAGGTTTCATCTTGTTTTGAGGATTGGATATTTCATTTTGCTCAGCTGTTTAAAAATCATGTTGGGTTTGAATCTGATAGATATTTGGATATTCATGAAGTTGGGTTTGAGCTATACAATGAGGCCTTGGAGGAGACAGTTACAAGTGAAGAAGCACAAAACCTTTTCCAGACAGCAGAAGAGAAATTTCAAGAGATGGCTGCTTTGGCATTGTTCAACTGTGGCAATGTTCACATGTCAATGGCAAGGAAGAGGGTTTGTTTCACAGATGATTGTTCTGAAGAAAACAAAGTTGCGCAAATCAGAAGCGCATATGATTGGGCACAAAAAGAATATATGAAAGCTGGAGAGAAATATAAGGAAGCAGTAAATATCAAAGCAGATTTTTATGAAGGCTTTCTAGCACTAGGGAGGCAGCAGTTTGAACAGGCCAAACTTTCTTGGTGTTACGCAATCAGCAACAATGTTGATCTGAAAGAATTGCCTTCCACTGAGGTTCTTGAGCTTTATAATTGTGCAGAGGACAACATGGAAAAAGGGATGCGTTTTTGGGAAGAATTGGAAAAAAACCGAATGAAGACCTCTAATTTGAAAGATCCTAAATTTCAGTTGCAGAAATTGGGGTCGAATGGCTTCTTGAAAGAAACTTCTCTAGATGAAACTTCTGAACAGGCAGCAGTTACGAGGTCTCAAATAGAACTTTTATGGGGTACCATATTGTATGAGCGTTCAGTTGTGGAATTCAAGCTGGACCTACCAGTTTGGCATGAAACTCTTGCGGTTGCAGTTGAAAAGTTCGCGCTTGCTGGGGCTTACCCAACTGATATAGCTGTCATGGTGAAAAACCATTGTTCAAACAATACTTCTTTGCAAGGTTTCAAAATCGAGGAGTTAGTGCAAGCATGGAATGAAATGTATGAAGCCAGAAAGTGGCAGAGAGGTATTCAGTCATTTCGATTGGAACCATTATTTAGGAGGCGCGTTTCAAAAATCTATCAAGCATTGGAGCATGCTTGA 2199 0.4065 MGKRSEKKKKNLRDGYGDDTGSPRKTGENSPKEYDSDTLAFISMAQELKDEGNKLFQKRDQEGAILKYEKAIKLLPKNHIDVSHIRSNIAACYMQMGISEYPKAIRECNAAMAVTPKYSKALLKRARCYEGLNRLDLAFRDVSAVVNMEPHNVTALEIRERVKAALESRGLKVTDSVIELPSDYVEPPYALPPAKVVKDKRRKKKSSKAKESKINSRTEGEKADDEFEEMAAQDRNEERAVNEFEDYETAEKPDEKKDDEVKEVVEEKISTKREDIPMRTVKLFFGEDIRCAQLPVNCSLLQLRQLIRDRFPSSNAVLVKYQDNEGDLVSITADEDLRLAEVSSLSQNSLRLYVVGVHPDHDPYFVKLNNEKEVRSPGIHDVPKKGCIVKEKEVKVSSCFEDWIFHFAQLFKNHVGFESDRYLDIHEVGFELYNEALEETVTSEEAQNLFQTAEEKFQEMAALALFNCGNVHMSMARKRVCFTDDCSEENKVAQIRSAYDWAQKEYMKAGEKYKEAVNIKADFYEGFLALGRQQFEQAKLSWCYAISNNVDLKELPSTEVLELYNCAEDNMEKGMRFWEELEKNRMKTSNLKDPKFQLQKLGSNGFLKETSLDETSEQAAVTRSQIELLWGTILYERSVVEFKLDLPVWHETLAVAVEKFALAGAYPTDIAVMVKNHCSNNTSLQGFKIEELVQAWNEMYEARKWQRGIQSFRLEPLFRRRVSKIYQALEHA* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01740 732 MobiDBLite consensus disorder prediction 7 32 - -
Pte2g01740 732 SUPERFAMILY TPR-like 44 166 IPR011990 GO:0005515
Pte2g01740 732 Gene3D - 278 359 - -
Pte2g01740 732 MobiDBLite consensus disorder prediction 195 261 - -
Pte2g01740 732 Pfam PB1 domain 279 355 IPR000270 GO:0005515
Pte2g01740 732 Gene3D Tetratricopeptide repeat domain 42 171 IPR011990 GO:0005515
Pte2g01740 732 SMART tpr_5 83 118 IPR019734 GO:0005515
Pte2g01740 732 SMART tpr_5 119 152 IPR019734 GO:0005515
Pte2g01740 732 SMART tpr_5 45 78 IPR019734 GO:0005515
Pte2g01740 732 MobiDBLite consensus disorder prediction 211 261 - -
Pte2g01740 732 MobiDBLite consensus disorder prediction 1 36 - -
Pte2g01740 732 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Pte2g01740 732 SMART PB1_new 278 357 IPR000270 GO:0005515
Pte2g01740 732 PANTHER PROTEIN CLMP1 1 731 IPR044517 -
Pte2g01740 732 SUPERFAMILY CAD & PB1 domains 275 367 - -
Pte2g01740 732 ProSiteProfiles PB1 domain profile. 278 357 IPR000270 GO:0005515
Pte2g01740 732 CDD PB1 280 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01740 Pte-Chr2 37096488 37099820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01740 34 152 Calmodulin-binding Proteins AT3G25230 29.231 1.19e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01740 K26538 - mnt:21388917 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01740 2 37096488 37099820 Pte2g01740 2 37096488 37099820 RCT