Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01683 ATGTGTCCTTCGGGCAGAAATCTCAATGATTGTTCTCCTCCTCCTCTTTCAGGAACTAGCCCTGGCGCCGGCACCTTTGGTTTCCGTCCAGCATTTGAAGTGCTTGATGCTGACAAAGACGGCAAGATAAGTAAGGATGACCTCCGGACGTTCTACTCTGGTTTTGTTCCGAACGCGGATGGGAACGGTGGCGAAAGCGAGATCACTCCAGATGAAGACGATGTCATTGGGTCCATGATGACGGTGGCAGATTTGAACAAAGATGGGTTCGTGGAATACGAGGAGTTCGAGCAAGTTTTGTTGGGTGGATCCAGAAATGGCATCAGGAGCCCTTTGGGTTTTGGAGTAATGGAGGATGTGTTTAGAGTTATGGACAAGGATGGGGATGGCAAGCTCACCCACGATGATTTGAAGAGTTACATGGAGTCAGCTGGAATTTCTACTTGCGATGAAGAAATTAAGGCTATGATTAAACTTGGGGGTGGAGATGGTAACGGAGTCACTTTCGACGGTTTGCTCAAAATATTGGCCGTTTGA 537 0.4804 MCPSGRNLNDCSPPPLSGTSPGAGTFGFRPAFEVLDADKDGKISKDDLRTFYSGFVPNADGNGGESEITPDEDDVIGSMMTVADLNKDGFVEYEEFEQVLLGGSRNGIRSPLGFGVMEDVFRVMDKDGDGKLTHDDLKSYMESAGISTCDEEIKAMIKLGGGDGNGVTFDGLLKILAV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01683 178 ProSiteProfiles EF-hand calcium-binding domain profile. 31 58 IPR002048 GO:0005509
Pte2g01683 178 ProSitePatterns EF-hand calcium-binding domain. 36 48 IPR018247 -
Pte2g01683 178 PANTHER CALCIUM BINDING PROTEIN 118 169 - -
Pte2g01683 178 SUPERFAMILY EF-hand 26 166 IPR011992 -
Pte2g01683 178 Pfam EF hand 117 143 IPR002048 GO:0005509
Pte2g01683 178 ProSitePatterns EF-hand calcium-binding domain. 84 96 IPR018247 -
Pte2g01683 178 Gene3D - 23 102 - -
Pte2g01683 178 CDD EFh 118 177 IPR002048 GO:0005509
Pte2g01683 178 ProSiteProfiles EF-hand calcium-binding domain profile. 71 106 IPR002048 GO:0005509
Pte2g01683 178 SMART efh_1 75 103 IPR002048 GO:0005509
Pte2g01683 178 SMART efh_1 116 144 IPR002048 GO:0005509
Pte2g01683 178 SMART efh_1 27 55 IPR002048 GO:0005509
Pte2g01683 178 Gene3D - 116 177 - -
Pte2g01683 178 CDD EFh 28 96 IPR002048 GO:0005509
Pte2g01683 178 MobiDBLite consensus disorder prediction 1 23 - -
Pte2g01683 178 ProSiteProfiles EF-hand calcium-binding domain profile. 112 147 IPR002048 GO:0005509
Pte2g01683 178 ProSitePatterns EF-hand calcium-binding domain. 125 137 IPR018247 -
Pte2g01683 178 Pfam EF-hand domain pair 29 99 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01683 Pte-Chr2 35921036 35922275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01683 1 179 EF-hand Containing Proteins AT5G49480 51.630 3.01e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01683 K02183 - qsa:O6P43_003687 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01683 2 35921036 35922275 Pte2g01683 2 35921036 35922275 RCT