Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01273 ATGTATCGGGTCCGAACTCTGTTCTGCAAGTCTTCGCCGGAGTCACGAACATACTCTTACAATATGGCGGAAGAGATCAGCAACACCGAACTCCGATCAACTGAAACTGCATCGTCGACTTCAAATTCCACCCGACGGTGGTCTTCTCTCCTCCGTTGGATTCCGACTTCCACCGACCGTATTATTGCCGCAGAGAAGCGCCTACTTTCTCTTGTCAAGACTCCGTATGTCCAGGAACAAGTCAGTGTAGGTTCTGGACCACCAGGGTCAAAAATTAGATGGTTTCGTTCCAAAAGTGACGAGCCAAGGTTCATCAATACTGTCACATTTGACAGCAAACATGATTCTCCTACCCTTGTAATGGTTCATGGATATGCTGCTTCCCAGGGATTCTTTTTTCGGAACTTTGATGCTCTTGCCAGTCGCTTCAGGGTCATTGCCATCGATCAACTTGGTTGGGGTGGATCTAGCCGGCCAGACTTTACATGCAAAAGTACTGAGGAAACGGAAGCATGGTTCATAGATTCTCTGGAGGAGTGGCGGAAAGCTAAAAATCTCAGTAATTTTATATTACTAGGACATTCTTTTGGTGGTTATGTTGCTGCCAAATATGCACTTCAGCATCCTGAGCATGTTAAGCACTTGATTTTGGTGGGACCAGCTGGGTTTTCTTCAGAATCAGATCCAAACTCTGAGCTTATTACACGTTTCAGAACAACATGGAAAGGAGCCATCTTGAACCATCTTTGGGAATCAAATTTTACTCCTCAGAAGCTTGTCAGAGGTCTAGGTCCTTGGGGGCCAGGCCTAGTCAGGAGGTATACAAGTGCTAGATTTGGCACGCATTCAACTGGAGAAACATTAACAGATGAGGAGTCAACGCTGCTAACAGAGTATGTTTATCATACATTAGCTGCAAAAGGAAGCGGCGAGCTGTGTTTGAAATATATATTTGCTTTTGGAGCCTTTGCCCGAATGCCCTTGCTGCATAGCGCACCAGAGTGGAAAGTACCAACCACTTTCATATATGGTGTCCAGGATTGGATGGATTACAAAGGGGGCCAAAAAGCTCGTGAGCTTATGAAAGTGCCATGTGAAATTACAAGAGTTCCTCGGGGTGGTCACTTTGTGTTCATAGATAACCCGTCTGGCTTCCACGCTGCCGTTTTTTATGCATGCCGAAGGTTTCTTTCTCCTGACCCTGATAATGAACCGTTCCCTGAAGGGTTGATCTCTGCATAA 1242 0.4589 MYRVRTLFCKSSPESRTYSYNMAEEISNTELRSTETASSTSNSTRRWSSLLRWIPTSTDRIIAAEKRLLSLVKTPYVQEQVSVGSGPPGSKIRWFRSKSDEPRFINTVTFDSKHDSPTLVMVHGYAASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSLEEWRKAKNLSNFILLGHSFGGYVAAKYALQHPEHVKHLILVGPAGFSSESDPNSELITRFRTTWKGAILNHLWESNFTPQKLVRGLGPWGPGLVRRYTSARFGTHSTGETLTDEESTLLTEYVYHTLAAKGSGELCLKYIFAFGAFARMPLLHSAPEWKVPTTFIYGVQDWMDYKGGQKARELMKVPCEITRVPRGGHFVFIDNPSGFHAAVFYACRRFLSPDPDNEPFPEGLISA* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01273 413 PRINTS Epoxide hydrolase signature 370 392 IPR000639 GO:0003824
Pte2g01273 413 PRINTS Epoxide hydrolase signature 142 157 IPR000639 GO:0003824
Pte2g01273 413 PRINTS Epoxide hydrolase signature 337 353 IPR000639 GO:0003824
Pte2g01273 413 PRINTS Epoxide hydrolase signature 205 218 IPR000639 GO:0003824
Pte2g01273 413 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 103 393 - -
Pte2g01273 413 Pfam alpha/beta hydrolase fold 117 238 IPR000073 -
Pte2g01273 413 PRINTS Alpha/beta hydrolase fold signature 191 204 IPR000073 -
Pte2g01273 413 PRINTS Alpha/beta hydrolase fold signature 205 218 IPR000073 -
Pte2g01273 413 PRINTS Alpha/beta hydrolase fold signature 142 157 IPR000073 -
Pte2g01273 413 PANTHER RE40534P-RELATED 50 390 - -
Pte2g01273 413 Gene3D alpha/beta hydrolase 63 391 IPR029058 -
Pte2g01273 413 SUPERFAMILY alpha/beta-Hydrolases 113 389 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01273 Pte-Chr2 14441583 14445060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01273 97 224 Acyl Lipid Metabolism Gene Families AT1G64670 30.882 1.31e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01273 - - cpap:110808507 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01273 2 14441583 14445060 Pte2g01273 2 14441583 14445060 RCT