Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01252 ATGTTCAGAAATCAGTACGACACGGACGTGACGACATGGAGCCCTGCCGGACGTCTGTTTCAGGTGGAGTATGCAATGGAAGCTGTCAAGCAAGGTTCGGCGGCAATAGGTCTACGATCCAAGACTCACGTCGTGTTAGCATGTGTCAACAAGGCCAATTCCGAACTCTCATCGCACCAGAAGAAGATCTTCAAGGTCGACGACCACATCGGGATCGCTATTGCTGGACTTACAGCCGATGGTCGGGTTCTCTCCCGCTATATGCGCTCTGAGTGCATCAATTACAGCTATACCTATGAGTCCCCTCTTCCAGTCGGACGACTCGTTGTGCAGCTCGCTGATAAGGCGCAGGTATGCACACAGCGTTCGTGGAAGCGGCCTTATGGGGTTGGCCTACTGGTTGGTGGCCTAGATGAATCTGGAGCTCACCTATATTACAATTGTCCAAGTGGTAACTACTTTGAGTACCAGGCTTTTGCCATCGGATCTCGGTCACAGGCTGCAAAGACATATCTAGAACGTAGATTTGAGAACTTCAAAGAATCTTCACGGGAAGAACTGATTAAGGATGCACTTATTGCTACGAGAGAGACCCTGCAAGGAGAAAAACTCAAGAGTTCCGTATGCACAATTGCAGTGGTCGGAGTTGGGGAGCCATTCCACATTTTGGATCAGTCTACTCTGCAGCAATTGATAGATGAAATTGATATTGTGAGGGAGGAAGAGACTCCTGCTGCTGAACAAGGTCCAGCTGCAGAGGAGGGTCCTGGTGCCGATCAGAGTGCTGCTGGTGACCAAGGTGCTGCTCCCATGGATATTTGA 822 0.5012 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGIAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFKESSREELIKDALIATRETLQGEKLKSSVCTIAVVGVGEPFHILDQSTLQQLIDEIDIVREEETPAAEQGPAAEEGPGADQSAAGDQGAAPMDI* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01252 273 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Pte2g01252 273 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 10 239 - -
Pte2g01252 273 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 237 IPR029055 -
Pte2g01252 273 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Pte2g01252 273 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Pte2g01252 273 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Pte2g01252 273 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
Pte2g01252 273 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Pte2g01252 273 MobiDBLite consensus disorder prediction 240 273 - -
Pte2g01252 273 FunFam Proteasome subunit alpha type-6 2 232 - -
Pte2g01252 273 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01252 Pte-Chr2 14015701 14018505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01252 K02725 - qsa:O6P43_018596 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01252 2 14015701 14018505 Pte2g01252 2 14015701 14018505 RCT