Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01158 ATGGCTCTGCATCTAAACCAGTTTCGACAACAACATTACCAAAACCAATCATCGAATTCCCATGCCTTCAGGATTTTACAGACGATTGACGGTCAAATTTCACAACCAGTTGCCTACAGCAACCCCAACGATTTACGAGATCAATCTCAGCATCCTCCGTACATTCCTCCGTTTCATGTTGTTGGGTTTGCACCCGGTCCAATTCCTAACGCAGATGCCAGTGATGGCGGGTTGGATTTACAGTGGAATTACGGTTTTGAACCCAAGAGCAAAAGACTAAAGGAACAAGATTTCTTCGAGAACAATTCTCAGATATCTGTTGATTTCTTGCCACCACCGAGTGTTTCCACGGGATTGGGTTTGTCACTTGACTATAACCATGGGACTTCGACTGGGGAGCCGACCTTGTTGTCACTTATTGCAGATGATGTTGATAGTGAACTGCAGAGACAGGACGCAGAGATTGAGAGGTTTCTCAAAGCCCAGGGTGATCGATTGCGGCAAAACATCTTGGAGAAGGTCCAGGCTACACAGTTGCAAAGTCTCTCACTTATGGAAGAGAAAGTCATTGAAAAACTCCGTGACAAAGAAGCACAGGCTGAGAGCATTAATAAGAAGAATATGGATCTTGAAGAGAGGATAGAGCAGCTCCGACTTGAAGCAGAAGCCTGGCAGCAGCGGGCCAGATACAACGACAACATGATTGCTGCTCTCAAGTTTAATCTTCAGCAAGTTTTTGTTCAAGCTAGGGAGAGTAAAGAAGGTTGTGGCGATAGTGAGGTTGATGATAAAGCTTCTGGGTGCAATGGCCGCTCCATTGACTTTGACCTCCTTTACAACAATAACGACCGAATGAAAGATATGATAACATGCAAGGCTTGCAAGGTTAAAGAAGTGTGCATGCTCTTGTTACCATGTAAGCATCTCTGTTTGTGTAAAGAGTGTGAAAGTAAGCTTAGCTGTTGCCCCGTGTGTCAGTCCTCAAAATTCATTGGAATGGAGGTCTATATGTAA 1014 0.4448 MALHLNQFRQQHYQNQSSNSHAFRILQTIDGQISQPVAYSNPNDLRDQSQHPPYIPPFHVVGFAPGPIPNADASDGGLDLQWNYGFEPKSKRLKEQDFFENNSQISVDFLPPPSVSTGLGLSLDYNHGTSTGEPTLLSLIADDVDSELQRQDAEIERFLKAQGDRLRQNILEKVQATQLQSLSLMEEKVIEKLRDKEAQAESINKKNMDLEERIEQLRLEAEAWQQRARYNDNMIAALKFNLQQVFVQARESKEGCGDSEVDDKASGCNGRSIDFDLLYNNNDRMKDMITCKACKVKEVCMLLLPCKHLCLCKECESKLSCCPVCQSSKFIGMEVYM* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01158 337 Coils Coil 186 227 - -
Pte2g01158 337 ProSiteProfiles Zinc finger RING-type profile. 291 326 IPR001841 -
Pte2g01158 337 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 273 337 - -
Pte2g01158 337 Gene3D - 145 164 - -
Pte2g01158 337 PIRSF SBP1_RNase_bind 10 337 IPR017066 -
Pte2g01158 337 CDD mRING-HC-C3HC5_CGRF1-like 290 325 - -
Pte2g01158 337 Gene3D - 300 327 - -
Pte2g01158 337 Gene3D Death Domain, Fas 165 299 IPR011029 -
Pte2g01158 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 86 335 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01158 Pte-Chr2 12647422 12650180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01158 291 327 Miscellaneous Gene Families AT4G39050 45.946 9.19e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01158 K19042 - gmx:100783373 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01158 2 12647422 12650180 Pte2g01158 2 12647422 12650180 RCT