Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01149 ATGGGCCAGTCCGCTTCGACGGCGGCGATTAGCTTAAGCCGTCGAGATAGCAATCATAGCCATCGATTCAAGTTCAGACCAACGGATCTGGTTTCTCCTATGCTGTCTGATGATTCCAACGAGTACCTTCATGTTGTAAACCACGAGCTTCATGACTACACCTCCGATCTTCCCGATGAGTGCTTGGCAAGCATTTTTCAGTCTCTCGGCCCTGGAGACCGGAAAATATGCTCTCTTGTCTGCCGCCGTTGGCTTCAAATCGAAGGTCAGAGCCGTCAACGGCTCTCTCTCAAAGCTGAATCCGATCTCCTCCTAAAGATCCCATCTATCTTCTCAAGATTCGATGCCGTCACGAAGCTCGCTCTTAAATGTGACCGCAGAGCGGTTAGCATCGGTGATGACGGGCTCATCCTCATTTCTCTCCACTGCCGTAACCTCACGCGCCTCAAACTACGTGCCTGCAAGGAGCTTACTGATATTGGCATGGAGGCCTTCGCCAAGAATTGCAAGAGTTTGAAAAAACTCTCATGTGGATCGTGCACCTTTGGAGCCAGAGGTATGAACGCCGTTCTCGATAATTGCTCCCAACTCGAAGAATTGTCGGTGAAGCGCCTTAGAGGGTCTACCGATGGACCTTCGGCGGAACCCATCGGGCCTGGAGTTGCAGCGTCGTCTCTCAAAACGATTTGCATGAAGGATCTGTATAACGGGCAGTGTTTCGGGCCGCTTATAATGGGTTCGAAGAATCTGAGGACTTTGAAGATTTTTAGGTGCTCCGGTGATTGGGATAAGATTCTTCAAGTTGTCGCTGATGTAATTTTAACTGTGATCGAATTACATCTTGAGAGGATACAAATTAGTGATGCTGGTCTCATAGCAATATCGAATTTTTCTAATCTAGAAATTTTACATCTTGTCAAGACCCCAGAGTGTACAAATTGGGGGATAGTTTCAGTTGCAGAAAAATGTAAGCTTTTAAGGAAGCTTCATATTGATGGGTGGAAAGCCAATCGAATAGGCGATGAAGGCTTGATAGCTGTTGCGAAATATTGCCCAAATCTGCAGGAATTGGTACTAATTGGGGTCAACCCTACAAAGGCGAGCTTGGAAGTTTTGGCATCTGGTTGTCTGAATTTAGAGAGGCTAGCTCTGTGTGGAAGTGATACAGTTGGGGATGTCGAAATATCGTGTATTGCAGAAAAATGTATGGCGTTGAAAAAGCTTTGTATTAAGAGTTGCCCTGTGTCTGACCACAGTATGGAAGCACTTGCAGGAGGATGTCCTAATTTGGTCAAAGTAAAGGTGAAAAAGTGTAAACATGTAACGCCCGAGGGTGCAGCTTGTTTGAGGTTAATTAGAGCTTCGCTCTCCGTCAATTTGGATACTTGTGAAACAGAGCAACAGGATGCAAGTACTAGTGACGGCGGAGCTCAGGACAATGGTATGGAATTTCCTCCATTGCCCACTGTCATGGCAGGTCCAAATATCACATCAAACAGTACTGCTCGATCAACTTCCTTTAAGGCAAGATTAGGGCTTTTTGGTGGGAGGAGTCTTGTGGCTTGCACCTTCAGAAAGTGGTCTACTGGTAGCAGCAGTTCAAGGAATAGCTAG 1614 0.4653 MGQSASTAAISLSRRDSNHSHRFKFRPTDLVSPMLSDDSNEYLHVVNHELHDYTSDLPDECLASIFQSLGPGDRKICSLVCRRWLQIEGQSRQRLSLKAESDLLLKIPSIFSRFDAVTKLALKCDRRAVSIGDDGLILISLHCRNLTRLKLRACKELTDIGMEAFAKNCKSLKKLSCGSCTFGARGMNAVLDNCSQLEELSVKRLRGSTDGPSAEPIGPGVAASSLKTICMKDLYNGQCFGPLIMGSKNLRTLKIFRCSGDWDKILQVVADVILTVIELHLERIQISDAGLIAISNFSNLEILHLVKTPECTNWGIVSVAEKCKLLRKLHIDGWKANRIGDEGLIAVAKYCPNLQELVLIGVNPTKASLEVLASGCLNLERLALCGSDTVGDVEISCIAEKCMALKKLCIKSCPVSDHSMEALAGGCPNLVKVKVKKCKHVTPEGAACLRLIRASLSVNLDTCETEQQDASTSDGGAQDNGMEFPPLPTVMAGPNITSNSTARSTSFKARLGLFGGRSLVACTFRKWSTGSSSSRNS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01149 537 FunFam F-box/LRR-repeat protein 4 54 92 - -
Pte2g01149 537 Gene3D Ribonuclease Inhibitor 106 214 IPR032675 -
Pte2g01149 537 Gene3D Ribonuclease Inhibitor 217 482 IPR032675 -
Pte2g01149 537 CDD F-box_AtTIR1-like 55 92 - -
Pte2g01149 537 SUPERFAMILY RNI-like 104 468 - -
Pte2g01149 537 Gene3D - 53 92 - -
Pte2g01149 537 Pfam Leucine Rich repeat 142 166 IPR001611 GO:0005515
Pte2g01149 537 SMART LRR_CC_2 427 452 IPR006553 -
Pte2g01149 537 SMART LRR_CC_2 323 350 IPR006553 -
Pte2g01149 537 SMART LRR_CC_2 297 322 IPR006553 -
Pte2g01149 537 SMART LRR_CC_2 143 168 IPR006553 -
Pte2g01149 537 SMART LRR_CC_2 169 193 IPR006553 -
Pte2g01149 537 SMART LRR_CC_2 376 401 IPR006553 -
Pte2g01149 537 SMART LRR_CC_2 351 375 IPR006553 -
Pte2g01149 537 SMART LRR_CC_2 402 426 IPR006553 -
Pte2g01149 537 SUPERFAMILY F-box domain 52 87 IPR036047 GO:0005515
Pte2g01149 537 FunFam F-box protein SKIP2 89 470 - -
Pte2g01149 537 Pfam F-box domain 55 87 IPR001810 GO:0005515
Pte2g01149 537 PANTHER UNCHARACTERIZED 55 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01149 Pte-Chr2 12546285 12548753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01149 - - mof:131161756 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01149 2 12546285 12548753 Pte2g01149 2 12546285 12548753 RCT