Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01129 ATGTCGACGACGGAGCAGCCTCCGAAGAAGCGGAAGCTATACGAGTCTGTAGTAGAGTCACAACAACCAGCTCTGCCACCTCCATCATCGATAACAACATCGCCACTGCCACCCTCGCAAACCCTAGCACAGAACCAGAGCTCTGTTCCTCTGCCATCGACACCGCCATTGTCTCAGGAGGATATACTTTTGAAGCGTAGAAACAAGGAGGAGATTCAAAACGTTTATGAATGCTATAAGCGGATTAAATTATGCTTGTCTCAGAAAGATGGCGTGGTTATGCCTGACCTTCAACAAACTTACCTCTCTCTTGTTACTGCAGCACGAGGTTGTTCTAGCGTTCAAAGGATTCTCGCTGAACTTATTCCTAGATATGCTTCTCAATGTCCAACTGCTCTGGATACTGCAGTTGAAGTGGTGATCAATATGCATAATTGGAGTGTGGAGATAATGAGTAGAGGAGAAGATCTTGATTCTATAGCTTTTCAAACTGCTAAAGCCTGTATTTCTGGAGTAGCTCAGATATGTGGCATTGCTGCTAAAGTGGCACGAACATCGTCTACTATTAAAGGCATATGTTCCTTAGTTTTTAAGAATGTGTTAGTCTTCTTTATATCCTCTTTTGATGGGGGAAAATATGGTTTCGATGATCGACAAGGATTTACTGAAAATGCAAGATTCCTCACAGGTCTTTTCAGAGTTGAAAGAAAAGTGTCAAGCAACTTTGGAAGCAACTTTGGTGATGATTTGGTTTGTCTATTAGATGGAATACATTCTGGGATTGAAATATGTAAAGATTCTATTAAAACTAGCAAAGGAGGCCATGATGTAGATGAAAAGAATCTGTCAAGAGATGACAATCACAGTGATGACGTGTCTCCTTTTCAAAAGAGATGCTTATTGTCGCTGGTTCTGGGGAAAGATCCTTCTCTGTCTCATTGGATATTATCAAAATGTCAACAGCTACCAGAAATATCATCTGATGCATTCTTGGAAATCAAATCAGGAATTGAAGCAGTCATTAGGCCATTCTCCCAAAGAAAAGGAATGGATGACCCTGGAGTGGAAAGTGACGAGGATATGTCTTTTTCATCTACTCATGTCGAGAGACACTCAGTGTCGGGGATTTATGTGGGAAATGAAAGCAGCAGCGAATTATCCCTGAAGGATATTGATGTAAAATTTTGTGATCAACATCCGATGGCTTGTGGATCTTGCATTCCTCATAGAAATAACCTTATATCTGCAGGGGGTTCTACCTGCAGCAATGAAGTTTCAAGGTCCTTGGGCCCAGAGATGGGAGGGCGGGGAGAAATTCCATACTGTAGGTCGTCTGCACCTGTTGATTTATCAAACCACCAGATTCCATCTCCAGCCGCTAGACCACCATTAGTCTTCAGGAGTAACTCATTCGAAGGGAGACATGATTTTTCACATATTGAGAAAAATCAGGCTCCGGGTAAGGATTTTAATATTCCATCTTCAAGATCTTCAAATGGAGGAGCGAGCCATGCTTTAATATCCCCTCAAAACCATCCAGTTTCACCATTTGCTTCTTCAAACAGTCAAAATGTTTGGTATTATGATGGGGATCCTGCATCCATGGACATAGTTTCTGCATCTAAACAGCTATGGATTGGGTTTCCAGCAGCTGATATGTCTGAAGCTCATGTTAGGTTTCAGTTGGAGAGGTTTGGTCCAATTGATCAATTCTTTTTCTACTCGCTAAATGGTTTTGCCGTGGTTGAGTACAGAAGTATAGTTGATGCGCTGAAGGCTCGACATTACACTCGTAGGAGTTTCCCTTGGCATGTTAAATTCATGGATATAGGACTAGGTAGCAGAGGAAGTATAAACTGCCTTGCAGTTGGCTCTAGTCCTTGTGTTTATGTTGGAAATGTTTCTAGTCATTGGGCCAAAGATGATATCCTTCATGAAATGAGAAAAGTAAGTTGTAAGGGTCCACCCATGGTTACTGAATTTGGCTGTGAGTGTGCACTACTGCTAGAGTTTGAAACTCCTGAAGAAGCTGCTTCTGTTATGGCACATCTTCGTAAGATAAGAAAAGAAAGATGTGACCGTGGGGTACCTCTGGGTACTGGACCAACTAATGCTGTAATGCCAAGTATGGATTGTGTAGTATCTGTTCCTGCTCCTTCTCACCTTGACCTTAAAGGCAATAACCCTACTAGCACTTCTACTAGTCTTGTTGGATCACCTCATGTCCGAAAGTTATCTGGAAGCCCTGCTGACCTTCGAATGAGAATGTCTCACTTGTCTTCCTTGATTGCTTCACTGCGTAACAAGTATAATAATCAAAATTTTGGTTTCTTTGAAAATCTTCCAGCGGGAAACAATCATCCAAGTTACATGAGGGAACAAGACACTGCACCTTCTAACACTCTCTGGATAAACCTTCCTGGCTCTGGCTCTCCTTTGATCACAGATGATGAGCTAATGTCCATTTGCAATCTTGCTATCGGAAACATTGGGTCCATTCTGCGGTTAACTCGAGGAAATACGCAGTTGGGACATTGTTGGTTTGTGGAATGCAATAGTGTAGAGACTGCAACCTCAGTTTTGAGGAATCTCCGTGGTTGTCCAGGGATATTCTTTCGGATAGAATTCAGTCAATTGGGAAGTGGAAGACCCAACTTTGTGCCATTCTCATTCAAACCAGAAAATTCTATGGAGCTAGTATCCCCAAGACTAAAATCTGACCTTCCCTGCAGTGCAGGTAGATTTTTTTCTCCCTTAAGATCATCTGAATCAGGGAGCCTTCCTTGTATACAAACTGGAAAACTGGGGCCTTATATTCCTTCACCACAACAGACACTACCATCTCCTTTTGGTCGGCCTGTTTACCTACCTTCAAATGGTCCCTGGAGTGCACCAGGAATGAATCATCCCATTCCTGTCAATCTACCTACTACTGGGGTGTCAGCCAATAATTTTCATGCTAATGCTGTCACAGCCCCTTTCATCCCTGCTTCTGTGACTCCCCTTGCCCAACTTCATGGTGCCCCCTTACAGCATTATGATCAATTGATTTCTCCATCTGTTGCACCACCACCACCACCACCGACTCTATCATCTTTGCCACCTCCTCAGCCTGATTTGCTGCCACCTACTCCTCCACCTCTGCCTCAGTCCCAACCTCCAGTTGTTCCACCACCACCTAATTCTCCTCCTCCTCTTCCTCCACCACCCCCACTGCCAATTTCAGAATTGTCGGGAGGTTTGGAAATGTGTCAGCGATATCAGTGGCAGGGTGCATTGTGTAAAAGTGGGATCAGCTACTGCACCATTTTTGCTCTTAGAGTGGAGTCAAATATTTGCAAGTACTCAAATGCTATTCCTGAGCCTACAGAATGGCCTGCTAAATTAGACATGACCAAACGCACGGATTTTCAGCATGTAAAGTCAACTTTTAGTAGCACCCCACAAAATAGAAGGGAAGTCTGCCGGCTGATGCCATTGACAGCAAGTGACTATAAAGGCTTTCAGGATTTTATATTGTATCTGAAGCAGAGGGAGTGTGCAGGAGTTATTAAAATCGCATCTGCAAAATCCATATGGGCAAGGCTTCTTTTTATAGTTCCACCTTCACGTGAAACCTGTACGATGCTTTCTATCGCACCAGAGCCATCTGACTGCCTGATCGCTTTGGTTCTACCAAAAGAAACAAACTTTGAATGGGTATAG 3705 0.4327 MSTTEQPPKKRKLYESVVESQQPALPPPSSITTSPLPPSQTLAQNQSSVPLPSTPPLSQEDILLKRRNKEEIQNVYECYKRIKLCLSQKDGVVMPDLQQTYLSLVTAARGCSSVQRILAELIPRYASQCPTALDTAVEVVINMHNWSVEIMSRGEDLDSIAFQTAKACISGVAQICGIAAKVARTSSTIKGICSLVFKNVLVFFISSFDGGKYGFDDRQGFTENARFLTGLFRVERKVSSNFGSNFGDDLVCLLDGIHSGIEICKDSIKTSKGGHDVDEKNLSRDDNHSDDVSPFQKRCLLSLVLGKDPSLSHWILSKCQQLPEISSDAFLEIKSGIEAVIRPFSQRKGMDDPGVESDEDMSFSSTHVERHSVSGIYVGNESSSELSLKDIDVKFCDQHPMACGSCIPHRNNLISAGGSTCSNEVSRSLGPEMGGRGEIPYCRSSAPVDLSNHQIPSPAARPPLVFRSNSFEGRHDFSHIEKNQAPGKDFNIPSSRSSNGGASHALISPQNHPVSPFASSNSQNVWYYDGDPASMDIVSASKQLWIGFPAADMSEAHVRFQLERFGPIDQFFFYSLNGFAVVEYRSIVDALKARHYTRRSFPWHVKFMDIGLGSRGSINCLAVGSSPCVYVGNVSSHWAKDDILHEMRKVSCKGPPMVTEFGCECALLLEFETPEEAASVMAHLRKIRKERCDRGVPLGTGPTNAVMPSMDCVVSVPAPSHLDLKGNNPTSTSTSLVGSPHVRKLSGSPADLRMRMSHLSSLIASLRNKYNNQNFGFFENLPAGNNHPSYMREQDTAPSNTLWINLPGSGSPLITDDELMSICNLAIGNIGSILRLTRGNTQLGHCWFVECNSVETATSVLRNLRGCPGIFFRIEFSQLGSGRPNFVPFSFKPENSMELVSPRLKSDLPCSAGRFFSPLRSSESGSLPCIQTGKLGPYIPSPQQTLPSPFGRPVYLPSNGPWSAPGMNHPIPVNLPTTGVSANNFHANAVTAPFIPASVTPLAQLHGAPLQHYDQLISPSVAPPPPPPTLSSLPPPQPDLLPPTPPPLPQSQPPVVPPPPNSPPPLPPPPPLPISELSGGLEMCQRYQWQGALCKSGISYCTIFALRVESNICKYSNAIPEPTEWPAKLDMTKRTDFQHVKSTFSSTPQNRREVCRLMPLTASDYKGFQDFILYLKQRECAGVIKIASAKSIWARLLFIVPPSRETCTMLSIAPEPSDCLIALVLPKETNFEWV* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01129 1234 Pfam SPOC domain 1083 1224 IPR012921 -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 270 289 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 35 55 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 488 504 - -
Pte2g01129 1234 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 271 1185 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 724 741 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 1 58 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 723 742 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 1016 1074 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 1019 1074 - -
Pte2g01129 1234 MobiDBLite consensus disorder prediction 481 504 - -
Pte2g01129 1234 SUPERFAMILY RNA-binding domain, RBD 551 683 IPR035979 GO:0003676
Pte2g01129 1234 CDD SPOC_FPA-like 1088 1226 - -
Pte2g01129 1234 Gene3D - 533 613 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01129 Pte-Chr2 12241979 12249631 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01129 K18667 - cave:132191024 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01129 2 12241979 12249631 Pte2g01129 2 12241979 12249631 RCT