Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01110 ATGGAGAACCCACAAAATGAAAATGCTGCTGGAAACTTTGAGAGCACAAGGAGGAGATTCATCTCGAACGATGAAAGCATCATCTTAAACCCAAACTTCGAGGATGGCTTGAATAATTGGTCTGGAAGAGGCTGCAAAGTTGTGATACACGACTCCATGGATGACGGGAAACTTGTACCTTTGTCTGGGAAGTACTTTGCAGCTGCCACTGAACGCAGGCAAAACTGGAATGGCATACAGCAGGAGATCACTGAAAGGGTCCAGCGCAAGCTTGCCTATGAGGTCACCGCAGTGGTACGAATATATGGTAACAATGTCAGTAGCAGTGATGGTAAGTTTCTTCTGAATGGCTCCTCGCCAAAGGCGGTGATCTTTTTACAAGGGCCTCCTCCAGGGACTGACATACTTGTAAATAGTCTGATGGTAAAGCATGCAGAGAAAACTCCTCCTTCAAATCCACCAAATTTTAAGAATGTTTCTTTTGGAGTAAATATAGTTCAAAACAGCAATCTAAGTGATGGTACAAAAGGGTGGTTCCCCCTTGGAAATTGCACATTAAATGTTGAAACTGGCTCACCTTGTATAGTTCCTCCAATGGCAAGAGATTCCCTTGTATCCCATGAAGCATTGAGTGGCCTATACCTCCTTGTAACCAACCGCACACAAACATGGATGGGGATCGCTCAGACGATCACTGATAAATTGAAACTTTTTGTGACTTACCAAGTTGCTGCTTGGGTGAAGATTAGTTCAGGGACAACTGGTCCCCAAAATATACAGCTTACTTTCAATATCGATAACCAGTGGGTTACGGTAGGACAAGTTGTGATCAGTGGTGATACATGGCATGAACTTGGAGGATCCTTCAGAATGGAGAAGCAGCCTTCCAAGGTCACTGTTTCTATCCAGGGTCCAGCTTCAGGTGTAAACTTAATGGTTTCAGGGCTTCTGATTTTTCCTGTTGATAGGAGTGCAAGGTTTAAATATTTGAGAAGACAGGCAGACAAGATCCGCAAGCGTGATGTGGTCCTTAAATTATCAGGATTAGATTCTAGCAGTTTCCCTGGAACCTTAGTAAAAGTCAAACAAACTGAGAGCAGCTTCCCACTTGGATCATGCTTCCTCAGAACAAACATGGATAATGAAGACTTCGTGGATTTTTTCGTCAAAAATTTTAACTGGGGTGTATTTGGCAATGAGTTGAAGTGGTATGCCACAGAGCCACAACAAGGGAATTTCAACTACAAAGATGCTGATGACATGCTAGCTCTGTGTGACAAGTACAAGATAGACTCTCGTGGCCACTGTATCTTCTGGGAAGTAGAAAGCACAGTTCAGCAATGGATCAAATCTTTGAACAAAAATGATTTAATGGCAGCTGTGCAAAACCGCTTGACAGGACTTCTTACTCGGTACAACGGAAAATTCAAGCACTATGATGTTAACAATGAAATGCTGCATGGCTCGTTTTACCAAGATAGGCTTGGGAAAGACATCCGAGCTAACATGTTCAAGACTGCACATCAACTTGACCCTTCTGCCACACTGTTCGTGAACGATTATAATGTGGAGAATGGACTTGACCCGAGGTCGTCTCCAGAGAAATATATTGAACTCATTCTTGATCTGCAAGAGAAAGGTGCTCCTGTTGGAGGGATTGGAATTCAAGGTCACATAGACAGTCCAGTAGGGTCAATTGTTTGTTCTGCTCTCGACAAGTTGGGAATACTTGGCCTTCCGATATGGTTCACCGAGCTTGATGTGGTTTCCGTTAATGAATATGTGAGAGCAGATGATTTGGAAGTGATGCTGAGGGAAGCTTTTGCTCATCCAGCAGTAGAAGGCATAATGCTGTGGGGTTTTTGGGAGTTGTTTATGTTTAGGGAAAACTCTCATCTGGTTAATGCAGAAGGTGAGATCAACGAAGCAGGTAAAAGGCTCCTTGCCCTCAAAAATGAGTGGCTGTCTTGTGCCCATGGTCATGTTGACGACAGTGGGGAATTTAGCTTCAGAGGCTTCCATGGAACATACGACGTGGAGATCATCACTTCATCTAAGAAGATTTCTAAGACATTAATTGTTGACAAGAGTGACTCTCCCCTCGTTGTCTCCGTAGATATTTGA 2124 0.435 MENPQNENAAGNFESTRRRFISNDESIILNPNFEDGLNNWSGRGCKVVIHDSMDDGKLVPLSGKYFAAATERRQNWNGIQQEITERVQRKLAYEVTAVVRIYGNNVSSSDGKFLLNGSSPKAVIFLQGPPPGTDILVNSLMVKHAEKTPPSNPPNFKNVSFGVNIVQNSNLSDGTKGWFPLGNCTLNVETGSPCIVPPMARDSLVSHEALSGLYLLVTNRTQTWMGIAQTITDKLKLFVTYQVAAWVKISSGTTGPQNIQLTFNIDNQWVTVGQVVISGDTWHELGGSFRMEKQPSKVTVSIQGPASGVNLMVSGLLIFPVDRSARFKYLRRQADKIRKRDVVLKLSGLDSSSFPGTLVKVKQTESSFPLGSCFLRTNMDNEDFVDFFVKNFNWGVFGNELKWYATEPQQGNFNYKDADDMLALCDKYKIDSRGHCIFWEVESTVQQWIKSLNKNDLMAAVQNRLTGLLTRYNGKFKHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQLDPSATLFVNDYNVENGLDPRSSPEKYIELILDLQEKGAPVGGIGIQGHIDSPVGSIVCSALDKLGILGLPIWFTELDVVSVNEYVRADDLEVMLREAFAHPAVEGIMLWGFWELFMFRENSHLVNAEGEINEAGKRLLALKNEWLSCAHGHVDDSGEFSFRGFHGTYDVEIITSSKKISKTLIVDKSDSPLVVSVDI* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01110 707 Pfam Glycosyl hydrolase family 10 364 621 IPR001000 GO:0004553|GO:0005975
Pte2g01110 707 PRINTS Glycosyl hydrolase family 10 signature 514 525 IPR001000 GO:0004553|GO:0005975
Pte2g01110 707 PRINTS Glycosyl hydrolase family 10 signature 546 558 IPR001000 GO:0004553|GO:0005975
Pte2g01110 707 PRINTS Glycosyl hydrolase family 10 signature 432 444 IPR001000 GO:0004553|GO:0005975
Pte2g01110 707 Gene3D - 21 137 - -
Pte2g01110 707 SUPERFAMILY Galactose-binding domain-like 24 147 IPR008979 -
Pte2g01110 707 Coils Coil 633 653 - -
Pte2g01110 707 SUPERFAMILY Galactose-binding domain-like 162 322 IPR008979 -
Pte2g01110 707 Gene3D Glycosidases 357 649 - -
Pte2g01110 707 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 355 650 IPR001000 GO:0004553|GO:0005975
Pte2g01110 707 Gene3D - 162 318 - -
Pte2g01110 707 SMART glyco_10 401 651 IPR001000 GO:0004553|GO:0005975
Pte2g01110 707 PANTHER GLYCOSYL HYDROLASE 149 699 IPR044846 GO:0004553|GO:0005975
Pte2g01110 707 SUPERFAMILY (Trans)glycosidases 356 655 IPR017853 -
Pte2g01110 707 FunFam Endo-1,4-beta-xylanase A 356 658 - -
Pte2g01110 707 Pfam Carbohydrate binding domain 164 307 IPR003305 GO:0016798
Pte2g01110 707 Pfam Carbohydrate binding domain 26 101 IPR003305 GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01110 Pte-Chr2 12054654 12058047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01110 14 707 Glycoside Hydrolase AT1G58370 68.313 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01110 - - qsu:112015573 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01110 2 12054654 12058047 Pte2g01110 2 12054654 12058047 RCT