Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01101 ATGGCTCTGCTCAGTCGAAACTCTACGCGCTTGCCTCAGCTGCTCGCAGCTGGCCGTGTTCTCTCCCTGCACACAACTCTTCCTTCTCTATACTCCGAGTCAACAAGCGGCACAACCACACCTACCCAATATGCGCGGCCTCCACCGCCATCCACTTCTTCTCCAACTGGCCTTTCTAAGGCCGCGGAGTTTGTCATCTCTAAGGTCGACGATCTTATGAACTGGGCTCGCCGTGGATCCATCTGGCCCATGACCTTCGGACTCGCTTGCTGTGCCGTCGAAATGATGCACGCCGGTGCCGCCCGTTACGATTTCGACCGGTTCGGAGTCATCTTCCGGCCCAGCCCCCGCCAGTCTGACTGTATGATTGTCGCCGGCACTCTGACCAACAAGATGGCACCCGCCCTTCGCAAGGTTTACGACCAAATGCCTGAGCCTAGGTGGGTTATCTCTATGGGAAGTTGTGCTAATGGGGGTGGATACTATCACTACTCGTACTCTGTTGTTCGTGGTTGTGACAGGATAGTTCCAGTGGACATCTATGTTCCTGGTTGCCCTCCCACTGCTGAGGCTTTACTCTATGGAGTTCTCCAGCTGCAGAAGAAGATTAATAGGCGCAAGGATTTCCTTCACTGGTGGACCAAGTGA 648 0.5478 MALLSRNSTRLPQLLAAGRVLSLHTTLPSLYSESTSGTTTPTQYARPPPPSTSSPTGLSKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVLQLQKKINRRKDFLHWWTK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01101 215 Gene3D - 61 215 - -
Pte2g01101 215 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 91 198 IPR006137 GO:0051536
Pte2g01101 215 SUPERFAMILY HydA/Nqo6-like 63 207 - -
Pte2g01101 215 MobiDBLite consensus disorder prediction 32 58 - -
Pte2g01101 215 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 171 187 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pte2g01101 215 PANTHER NADH DEHYDROGENASE 58 214 - -
Pte2g01101 215 FunFam NADH-quinone oxidoreductase subunit B 2 56 215 - -
Pte2g01101 215 NCBIfam NADH-quinone oxidoreductase subunit B 64 205 IPR006138 GO:0008137|GO:0048038|GO:0051539
Pte2g01101 215 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 56 204 IPR006138 GO:0008137|GO:0048038|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01101 Pte-Chr2 11987748 11989687 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01101 K03940 - mnt:21402461 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01101 2 11987748 11989687 Pte2g01101 2 11987748 11989687 RCT