Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g01012 ATGGCTTTGAGCAAGTTCTCTGCGATTCTCATCCTCTTCTCCCTAGTTGCCTATTCAACCACCTATACGGAGGCCTGTGGCTGCACCAAGCCAACACCTGTTCCACCAACTCCTGCATACATAGAACAATGCCCACGGGATACATTGAAGCTAGGGGTATGTGCTGACATTCTTGGACTTGTTAGCGTTGTTATTGGAAACCCGCCTTCTGGTACCCCTTGCTGTCCTTTACTAAAAGGTTTGACAGATCTTGAGGCTGCCCTTTGTCTGTGCACTGCCATTAAAGCCAATGTGCTTGGCATTAACTTGAACGTGCCAGTTGCTCTCAGTGTTATTCTCAGTGCTTGTCAGAAAACCGTTCCTCCTGGTTTCCAATGTGCATGA 384 0.4792 MALSKFSAILILFSLVAYSTTYTEACGCTKPTPVPPTPAYIEQCPRDTLKLGVCADILGLVSVVIGNPPSGTPCCPLLKGLTDLEAALCLCTAIKANVLGINLNVPVALSVILSACQKTVPPGFQCA* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g01012 127 CDD HPS_like 43 126 IPR027923 -
Pte2g01012 127 SMART aai_6 44 126 IPR016140 -
Pte2g01012 127 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 46 126 IPR036312 -
Pte2g01012 127 PANTHER - 7 126 - -
Pte2g01012 127 FunFam pEARLI1-like lipid transfer protein 1 42 127 - -
Pte2g01012 127 Gene3D - 42 127 IPR036312 -
Pte2g01012 127 Pfam Hydrophobic seed protein 44 127 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g01012 Pte-Chr2 10861536 10862387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g01012 36 126 Acyl Lipid Metabolism Gene Families AT4G22490 40.217 2.98e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g01012 - - gmx:100306307 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g01012 2 10861536 10862387 Pte2g01012 2 10861536 10862387 RCT