Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00788 ATGCAACGGTTGGCATCAAAGTTTAGCGGCAGAATTGTTCGTTCAACGTATGATGTCTTCATCAACCACCGTGGTATTGACACGAAGAGATCCATTGGCGGGTTGCTCTTTGATCAGCTTGCAAACATGGGAATCCGACCTTTCTTGGACAGCATGAACATGAAACCGGGGGACAGGTTATTCGAACATATTAAAAATGGCATAGTTGGGAGTAAGGTTGGAGTGGCAATCTTCTCCCCTCGTTATTGTGATTCCTACTTCTGTCTCCATGAGCTTGCTCTTCTAATGGAGACTCAAAAGAGAGTCATTCCATTATTTTTTGATGTGAAGCCATCTCAGCTTCACGTTAAGGACAATGGAACATGTCCAGATGACGAACTTCAGAGATTCAGGTCAGCCCTTGAGGAAGCCAAATACACGGTAGGACTAACCTTCGATTCCTCAACTGGAGACTGGTCGGAGTTGCTGAGGAATGTCTCAGATGCAATCCTAATCAATTTGGCTGAGGTTGAGGAAGAACGAAGGCGCAATGGCGAGCAAGGAAGACAATAA 552 0.4529 MQRLASKFSGRIVRSTYDVFINHRGIDTKRSIGGLLFDQLANMGIRPFLDSMNMKPGDRLFEHIKNGIVGSKVGVAIFSPRYCDSYFCLHELALLMETQKRVIPLFFDVKPSQLHVKDNGTCPDDELQRFRSALEEAKYTVGLTFDSSTGDWSELLRNVSDAILINLAEVEEERRRNGEQGRQ* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00788 183 ProSiteProfiles TIR domain profile. 15 163 IPR000157 GO:0007165
Pte2g00788 183 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 141 IPR035897 -
Pte2g00788 183 Gene3D - 13 171 IPR035897 -
Pte2g00788 183 Pfam TIR domain 17 164 IPR000157 GO:0007165
Pte2g00788 183 PANTHER COP1-INTERACTING PROTEIN-RELATED 14 175 - -
Pte2g00788 183 SMART till_3 16 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00788 Pte-Chr2 6701911 6702822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00788 14 178 Miscellaneous Gene Families AT1G57670 26.667 1.19e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00788 - - qsa:O6P43_031803 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00788 2 6701911 6702822 Pte2g00788 2 6701911 6702822 RCT