Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00008 ATGGCGGAGAAGTATAATCTGAAGAACCCAGCAGTAAAGAGGATTTTGCAAGAGGTTAAGGAGATGCAATCAAATCCGTCTGATGATTTCATGAGCCTTCCCTTAGAGGATAATATATTTGAGTGGCAATTTGCAATCACAGGCCCGCGTGACACTGAATTTGAGGGTGGAATCTATCATGGTCGAATTCAGCTTCCTGTAGAGTATCCATTTAAGCCACCTTCATTTATGTTATTGACGACACAAACCAAGATTTGTTTGAGCATATCAAATCATCATCCTGAGCACTGGCAACCATCATGGAGCGTGAGAACTGCTTTAGTTGCTCTTATTGCATTCATGCCAACCAACCCCAATGGTGCATTGGGTTCCTTGGACTATAAGAAAGAAGAGAGGCATTCCCTTGCCATTAAATCTCGTGAAGCATCCCCTAAATTCGGGACTCCTGAACATCAAAAACTTATTGATGAGGTACGATAG 480 0.4229 MAEKYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEDNIFEWQFAITGPRDTEFEGGIYHGRIQLPVEYPFKPPSFMLLTTQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERHSLAIKSREASPKFGTPEHQKLIDEVR* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00008 159 FunFam ubiquitin-conjugating enzyme E2 32 1 159 - -
Pte2g00008 159 Pfam Ubiquitin-conjugating enzyme 14 119 IPR000608 -
Pte2g00008 159 MobiDBLite consensus disorder prediction 138 159 - -
Pte2g00008 159 SUPERFAMILY UBC-like 11 127 IPR016135 -
Pte2g00008 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 121 - -
Pte2g00008 159 Gene3D Ubiquitin Conjugating Enzyme 1 158 IPR016135 -
Pte2g00008 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 159 IPR000608 -
Pte2g00008 159 SMART ubc_7 13 159 - -
Pte2g00008 159 CDD UBCc 12 121 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00008 Pte-Chr2 71502 73695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00008 3 158 Miscellaneous Gene Families AT3G17000 82.099 6.46e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00008 K10578 - gmx:100798396 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00008 2 71502 73695 Pte2g00008 2 71502 73695 RCT