Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02701 ATGTCAGCCGGACTGGGAAAATGCAGCAAGATCCGCCACATTGTAAGGCTTCGACAAATGCTCCGGCGGTGGCGCAACAAGGCCCGCATGTCTTCAGCGGCAAGTCGCGTGCCGTCGGACGTACCGGCCGGTCACGTGGCGGTCTGTGTCGGCTCCAGCTACAAGAGATTCGTCGTGCGCGCAACTCACCTAAACCATCCCGTCTTCAAGAGTCTATTGGTCCAAGCAGAGGAAGAATATGGCTTCATTAACCAGGGTCCCTTGGTGATTCCTTGCGATGAGTCCCTCTTTGAAGATATGCTTCGATACATATCACGCTCCGAATCCAGTAAATCAACCCGGTTCGTAAATCTGGAGGACTTCGAGAGGTACTGCCATGCAGGCATTCCCAATAGTCTGGACTTTTTGTCCGACTCTCGACCTCTGCTTCACTGA 435 0.5356 MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSSAASRVPSDVPAGHVAVCVGSSYKRFVVRATHLNHPVFKSLLVQAEEEYGFINQGPLVIPCDESLFEDMLRYISRSESSKSTRFVNLEDFERYCHAGIPNSLDFLSDSRPLLH* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02701 144 Pfam Auxin responsive protein 16 103 IPR003676 GO:0009733
Pte1g02701 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02701 Pte-Chr1 47080280 47082248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02701 5 143 Calmodulin-binding Proteins AT4G34750 52.778 1.15e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02701 K14488 - qsu:112012848 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02701 1 47080280 47082248 Pte1g02701 1 47080280 47082248 RCT