Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02694 ATGGCCAAACCATGCGTGTGTTGTGTTTCCATTTTGGCATTATTGGCGGTCGGTGGCGCTATTATCTATGTAGTCACGAAGAATAACCATAAGGCTTCGGTCCCCGGTCCCCCTGGCGCCATTATTCAGTCATACGCTGACGCTCTCAAACTCGCTCTGCAATTCTTTGATGTCCAGAAATCTGGTAAGTTGGTTGACAACAAAATAACTTGGAGAGGGGATTCTGGACTAAAAGATGGAAGCGAAGCGAAGCTGGACCTAACAAAAGGAATGTATGATGCAGGGGACCACGTGAAGTTTGGTTTCCCATTGGCATTTACCGCCAGTGTCTTGTCCTGGGCAATTCTCGAATATGGAGACCAAATGGAAGCAGTCAACCAGTTAGAATCTGCTCAAGATTCCCTCAAGTGGATCACTGACTTCCTTGTCAATGCTCATCCCGAAGATAATGTGCTTTATATTCAGGTGGGTGATCCAGATGCAGACCATAAATGTTGGAACAGGCCTGAAGATATGACTGAAGCACGGCCACTCTTACAAATCAACGCATCTTCTCCAGGAAGCGAGGTTGCGGCTGAAACTGCAGCAGCAATGGCCTCCGCATCTTTGGTCTTCAAGAAAATCGACTCGACATATTCAAGCACTCTTCTCAAACATGCAAAACAATTGTTCAGTTTCGCGGATAGGCACAAAGTTTCTTACTGCAAGAGTATTCCTGATGCGATTAATTATTACAATTCAACAGGATATGGCGACGAGCTCCTATGGGCAGCTAGCTGGCTGTACCACGCGACAGAAGACCAAACTTACATGGATTATGTGACGGGAAGTAATGGAGAAGAATATGCCCAATGGGGAAGCCCAACCTGGTTTAGCTGGGATAATAAGCTTGCTGGAGCTCAGGTTTTGTTGTCCAGATTAATCTTCTTTAAGGCAAAAGGTGTTTCAGACGACCTCCAAAATTACCAGGACACAGCCAAGGCTGTAATGTGCAACATCCTCCCTGATTCTCCGTCAGCCACATCCAGCAGAACTGAAAATGGTCTCATATGGGTTAGTGAATGGAACTCCCTGCAGCAACCTGTTGCTTCTGCTTTCTTGGCCACTCTTTACAGCGACTATATGCTAACTACCCAGGTTGAAAAAATAGAATGTGACGGAACTTCCTTCTCCCCATCTGATCTTCGAAAATTTGCCCAATCTCAAGCAGACTACGTATTGGGCAAAAATCCTATGGATATTAGTTTTCTTGTAGGATATGGGGATAAATACCCTAAGTTTGTGCATCACAGGGGAGCATCCATTCCAGCTAGTGAAAAACCTAGCTGCACTAATGGCTTCAAGTGGCTTGATTCATCAAAGCCCAATCCCAATGTAGCTACTGGAGCACTCGTTGGTGGACCTTTCCTGAATGAGACTTTCATCGATTCCCGGAACAATTCTATGCAAACGGAGCCTAGCACGTATAACAGTGCCCTCCTGGATAAAGAAAAAAACCTTGATTACATGCAAAAAGGAGGGTTTAAGCCATCATTCCCACAAGACATCTATCTTGTCCATGCTTATCCAAAAGAAGAACAAGAAGAAAAAACAAGGTTAGAAAAACGCCATGCCCACGTGATCACTGGCTTGTTCAATGTTTCTGGGCGTTCTTTATACAGCAAGGGCTATGTCACTGAACTCCACTACTTCATTCACTGGGACCTTGTACCCTCTTCCACCATTTGCTTCCTCACATCGTCTTGTACACGAGGCACTTCATCTCTGGTTCATAGGTACGGTCAAGGACAGGTGTCCTTTGACCTTTCTTCCATTATTCACGTGTATAGGATATCAACCTACCACTAG 1848 0.4513 MAKPCVCCVSILALLAVGGAIIYVVTKNNHKASVPGPPGAIIQSYADALKLALQFFDVQKSGKLVDNKITWRGDSGLKDGSEAKLDLTKGMYDAGDHVKFGFPLAFTASVLSWAILEYGDQMEAVNQLESAQDSLKWITDFLVNAHPEDNVLYIQVGDPDADHKCWNRPEDMTEARPLLQINASSPGSEVAAETAAAMASASLVFKKIDSTYSSTLLKHAKQLFSFADRHKVSYCKSIPDAINYYNSTGYGDELLWAASWLYHATEDQTYMDYVTGSNGEEYAQWGSPTWFSWDNKLAGAQVLLSRLIFFKAKGVSDDLQNYQDTAKAVMCNILPDSPSATSSRTENGLIWVSEWNSLQQPVASAFLATLYSDYMLTTQVEKIECDGTSFSPSDLRKFAQSQADYVLGKNPMDISFLVGYGDKYPKFVHHRGASIPASEKPSCTNGFKWLDSSKPNPNVATGALVGGPFLNETFIDSRNNSMQTEPSTYNSALLDKEKNLDYMQKGGFKPSFPQDIYLVHAYPKEEQEEKTRLEKRHAHVITGLFNVSGRSLYSKGYVTELHYFIHWDLVPSSTICFLTSSCTRGTSSLVHRYGQGQVSFDLSSIIHVYRISTYH* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02694 615 Pfam Glycosyl hydrolase family 9 45 494 IPR001701 GO:0004553|GO:0005975
Pte1g02694 615 Gene3D - 42 496 IPR012341 GO:0005975
Pte1g02694 615 SUPERFAMILY Six-hairpin glycosidases 44 494 IPR008928 GO:0005975
Pte1g02694 615 FunFam Endoglucanase 42 505 - -
Pte1g02694 615 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 405 431 IPR018221 -
Pte1g02694 615 PANTHER ENDO-1,4-BETA-GLUCANASE 21 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02694 Pte-Chr1 47023781 47028494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02694 5 492 Glycoside Hydrolase AT1G75680 67.540 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02694 - - tcc:18591535 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02694 1 47023781 47028494 Pte1g02694 1 47023781 47028494 RCT