Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02676 ATGCAACACGGAGATTACACCTCCGCTCCATACTATCAATTCCCTCACCTCCAAAACCCCATCCCCAATTCTATTCCGAATCCGACAACGAATCCCGCCGATCTTCAACCAAATCCGTACGCCTCCGCACCTCCGTTCACGTCGGGTTACACTCCGTCCGATTACAATCCTTATCCTTCAAACTACCCTCCATATGCTCAAAATTCCGATACTGTCCTTGTCCCCGGCTCAACACCGACGCCACCAACGTTAGTGCCTCCCGCTGCTTCTTCATATTCACCAGCACCTAACCCTAATTATCAGTCTCCCTTCAATCCCACTTCTCAATCTCCTTCCCTCCCGCCGTTTGAATCACACTCATCGTACGCAACATCTGCTCAACAACAGTCTTACTTCCCGACTTCTGATCACCATCAGACGGTTCCAACCAATTATGGGCCCACGCCGTCTCTTAATACAAATCCTAATCCGAATCCGTCGTACTCATTGTATTCCGATCCTCACTGTCAACAACCGAATTCGGTCCCTGCAGCTTACGATAGCCCGTATGAGAAGGCAGCCAAATTTAATCACTCGGGGTCTTATTTAGATGATTATGGCGGTTACAATCGGGGCAGGCCCGATTTGGAATCAGACATATACGGGAAGAGATCAGATAGTGGGATTGCGAGATATGATTCAGGTCGCGACGACTTGTATGGTGATGGCGTGTATGCGTATGAAGGAGGAAAGAAAGAGCCTTATGGTGCTCGGGGAACGGCGACCAAATCGTCAACGTGGGCCGGTTTCGATGATTTTGGGAGAGCAATTAGTTTTCCAACTGCAGTAGAATCCCCCAAGAGTTTGACCAAAATTGTGAAAGCGGTGCCAAAGGCTGACGTACAGGAGGACGTCAAAAGCGGGGTACAGAAGTTTCGAGTCAAGCTGCTGGCAGAAAGCGGTGGGCAGACGACTATGGATGTTCTTTGTCAGATTGGTCTAGATGGAATTCGCATGCTGGATCCAAGCACTAGTCGAACACTGAGAATATATCCACTAGAGAACATTACAAGATGTGACAAAATGGATTCCTCTACCTTAGCTTTCTGGTCCAAGAGCTCAGTGGACATTGAACCAAGACGAATCAGGCTGCAATCAAATAGTTACAGCACTAACACTCTCCTGGATACAGTGACTGCTGCAACCGTGCAGTTTAAGGAGATGGGTGGTACTACTAAGCTGCCTGACACATCGAATACAAGTGAGCAACCAGCAGAAAAAAAGAAAGGGATTGTTGATTGGATGAATATTATAAAGCCTCCTAATGAAGAGAAGGAACACTGGGTCCCTGATGAGGCAGTCTCAAAGTGCACTGCTTGTGGTGTAGAATTTGGGGCTTTTGTGCGTAGGCATCATTGCCGAAATTGTGGAGATATTTTCTGTGACAAATGTACTCATGGAAGAATTGCCCTGACGGCTGATGAGAATGCACCACAAGTTCGTGTTTGTGACCGATGCATGGCAGAAGTGACTCAGAGGCTAAGCAATGCTAAGGAAGCAAACACACCTTCTGGTTTGCAGAGTCATGAGGATCTGGCGAGAAAGCTTCAGGAGGAATTGGAGAGAAATCGTAAATCAACACCAGGTATAAAAAAATCAACTTCTATTTGCTTAGGAGAATTGAACTTTTCAAAGATAAATTCTTCCTATGCTCGCCAGAAGTTGTCATGCCCTACCGATAGCCCTTGTTATACTACTTATGTGTACTGGTGCATTTAG 1758 0.467 MQHGDYTSAPYYQFPHLQNPIPNSIPNPTTNPADLQPNPYASAPPFTSGYTPSDYNPYPSNYPPYAQNSDTVLVPGSTPTPPTLVPPAASSYSPAPNPNYQSPFNPTSQSPSLPPFESHSSYATSAQQQSYFPTSDHHQTVPTNYGPTPSLNTNPNPNPSYSLYSDPHCQQPNSVPAAYDSPYEKAAKFNHSGSYLDDYGGYNRGRPDLESDIYGKRSDSGIARYDSGRDDLYGDGVYAYEGGKKEPYGARGTATKSSTWAGFDDFGRAISFPTAVESPKSLTKIVKAVPKADVQEDVKSGVQKFRVKLLAESGGQTTMDVLCQIGLDGIRMLDPSTSRTLRIYPLENITRCDKMDSSTLAFWSKSSVDIEPRRIRLQSNSYSTNTLLDTVTAATVQFKEMGGTTKLPDTSNTSEQPAEKKKGIVDWMNIIKPPNEEKEHWVPDEAVSKCTACGVEFGAFVRRHHCRNCGDIFCDKCTHGRIALTADENAPQVRVCDRCMAEVTQRLSNAKEANTPSGLQSHEDLARKLQEELERNRKSTPGIKKSTSICLGELNFSKINSSYARQKLSCPTDSPCYTTYVYWCI* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02676 585 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 431 517 IPR013083 -
Pte1g02676 585 MobiDBLite consensus disorder prediction 28 78 - -
Pte1g02676 585 PANTHER PROTEIN FREE1 1 556 IPR045893 GO:0036258|GO:0043130
Pte1g02676 585 Coils Coil 519 539 - -
Pte1g02676 585 Pfam FYVE zinc finger 440 504 IPR000306 GO:0046872
Pte1g02676 585 MobiDBLite consensus disorder prediction 79 93 - -
Pte1g02676 585 MobiDBLite consensus disorder prediction 1 173 - -
Pte1g02676 585 FunFam Zinc finger, FYVE-type, endofin 431 509 - -
Pte1g02676 585 SUPERFAMILY FYVE/PHD zinc finger 439 509 IPR011011 -
Pte1g02676 585 MobiDBLite consensus disorder prediction 94 173 - -
Pte1g02676 585 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 444 504 IPR017455 -
Pte1g02676 585 SMART fyve_4 436 505 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02676 Pte-Chr1 46915591 46919457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02676 432 515 EF-hand Containing Proteins AT3G14270 33.684 2.74e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02676 - - qsa:O6P43_018705 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02676 1 46915591 46919457 Pte1g02676 1 46915591 46919457 RCT