Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02658 ATGGCCACCGTCACCTCTGCCGCTGCTGCTGTCAACTCATTCGCTGGGCTAAAGGCTACCGGCACAGCCACAACTAAAGTGAATGCACTGCCTTATAAGGTGTCAGCAACCTCGATGCCAAGGTTTGTTGTCAAGGCTTCTCTCAAGGATGTGGGCGCTGCGGTAGTGGCCACTGCTGCGAGCGCCATGTTAGCTAGCAATGCCATGGCTATTGAGGTGTTGCTTGGTAGTTCGGATGGATCTTTGGCATTCGAACCGAAGGACTTCACAGTGAGCGCTGGAGAAGAGATTGTGTTCAAGAACAACGCTGGTTTCCCACACAACGTTGTCTTTGACGAGGATGAAATTCCAAGTGGTGTTGACGCCAGTAAGATTTCCATGTCAGAGGAGGACCTTCTCAATGCGCCAGGAGAGACCTATGCCGTTAAATTGACTGAAAAAGGAACCTACCAATTTTACTGTTCTCCTCACCAGGGAGCTGGTATGGTGGGAAAAGTTACCGTTAATTGA 510 0.502 MATVTSAAAAVNSFAGLKATGTATTKVNALPYKVSATSMPRFVVKASLKDVGAAVVATAASAMLASNAMAIEVLLGSSDGSLAFEPKDFTVSAGEEIVFKNNAGFPHNVVFDEDEIPSGVDASKISMSEEDLLNAPGETYAVKLTEKGTYQFYCSPHQGAGMVGKVTVN* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02658 169 CDD Plastocyanin 71 169 IPR002387 GO:0005507|GO:0009055
Pte1g02658 169 ProSitePatterns Type-1 copper (blue) proteins signature. 148 162 IPR028871 -
Pte1g02658 169 NCBIfam plastocyanin 71 169 IPR002387 GO:0005507|GO:0009055
Pte1g02658 169 PRINTS Plastocyanin signature 76 95 IPR002387 GO:0005507|GO:0009055
Pte1g02658 169 PRINTS Plastocyanin signature 99 117 IPR002387 GO:0005507|GO:0009055
Pte1g02658 169 PRINTS Plastocyanin signature 148 167 IPR002387 GO:0005507|GO:0009055
Pte1g02658 169 Pfam Copper binding proteins, plastocyanin/azurin family 72 169 IPR000923 GO:0005507|GO:0009055
Pte1g02658 169 PANTHER PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED 23 169 - -
Pte1g02658 169 SUPERFAMILY Cupredoxins 68 169 IPR008972 -
Pte1g02658 169 PRINTS Type I copper blue protein family signature 146 160 IPR001235 GO:0005507|GO:0009055
Pte1g02658 169 PRINTS Type I copper blue protein family signature 90 103 IPR001235 GO:0005507|GO:0009055
Pte1g02658 169 PRINTS Type I copper blue protein family signature 105 120 IPR001235 GO:0005507|GO:0009055
Pte1g02658 169 Gene3D - 71 169 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02658 Pte-Chr1 46789801 46791209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02658 K02638 - twl:120009407 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02658 1 46789801 46791209 Pte1g02658 1 46789801 46791209 RCT