Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02550 ATGGAGAAAACAAAGTCATCCCTCGCGCAAATCCAGCCCCCAACATATGGGAACTTGATCACTGTTCTCAGCATCGATGGTGGAGGTATAAGGGGAATTATACCTGCTACGATTCTTGCTTTCCTAGAGTCACAATTACAGGAGTTGGATGGAGAAGACGCAAGGCTTGCTGATTACTTCGATGTTATTGCGGGAACAAGCACAGGTGGTCTCGTAACCGCCATGTTAACTGCCCCAAATGAAAAGAAGCGTCCGCTGTTTGCTGCCAAGGATATCAAGTCCTTCTACCTTGACCACTGCCCAAAAATTTTTCCACAAGAGAGAAACTTGTTTGGACCGGTCGGGAAGTTGTTCAAGTCTCTAGCAGGACCTAAGTACGACGGAAAATACCTTCATAGTCTGGCCATAGAGAAGCTAGGAGAAGCTAGGATGCATGACACCTTGACCAACATTGTCATTCCTACTTTCGACATCAAGCAAATGCAACCCACTATTTTCTCATCCTACCAGATCAAGCGAAATCCATGTTTGGATGCTCGGCTAGCTGATATATGCATCAGCACCTCGGCTGCTCCCACGTACTTACCCACATACTGCTTCAAGAATCAAGACTCCGAAGGAAATGAACACGAATTCCACCTCACGGATGGCGGGGTTGCCGCAAACAATCCGACTTTAGTCGCCGTGAACCAAGTAACACATCAATTGATCAGTCAAAATCCTGATTTTTTCCCAATCAAGCCTCTGGACTACGCTCGATTCGTCATAATCTCTATAGGCACTGGGACTGCAAAGAACGAGCAGAAAATCAATGCTAACATGGCGTCAAAGTGGGGCCTCTTGGATTGGTTGACCCATGGTGGTTCTGCGCCACTGATGGATATCTTCACCCAAGCAAGCGCAGATATGGTTGACTTTCATTTAGCTGTTCTCACTCAAGCACTTCATTCAGAAGACAATTATCTTAGAATACAAGATGACACATTGACGGGACCAGATAGTTCGGTTGATATTGCCACTAAGCAGAACTTGAACAGATTGGGGCAGATCGGTGAAAGCTTATTGAAGAAACCAGTGTCTAGGGTGAATCTGGAGACGGGTTTTTCTGAACCCATTCAAAATGGTGGCACCAATGAGGATGCGTTGAGAAAATTTGCACGAATGCTTGTTCAAGAAAGAAGGCTTCGGGAGATGAAATCACCACTCACATCCAAGGGCTTGGGACACAAGATTCCATCCTTTTCTTCCACTTCAAATCCCTAG 1263 0.4584 MEKTKSSLAQIQPPTYGNLITVLSIDGGGIRGIIPATILAFLESQLQELDGEDARLADYFDVIAGTSTGGLVTAMLTAPNEKKRPLFAAKDIKSFYLDHCPKIFPQERNLFGPVGKLFKSLAGPKYDGKYLHSLAIEKLGEARMHDTLTNIVIPTFDIKQMQPTIFSSYQIKRNPCLDARLADICISTSAAPTYLPTYCFKNQDSEGNEHEFHLTDGGVAANNPTLVAVNQVTHQLISQNPDFFPIKPLDYARFVIISIGTGTAKNEQKINANMASKWGLLDWLTHGGSAPLMDIFTQASADMVDFHLAVLTQALHSEDNYLRIQDDTLTGPDSSVDIATKQNLNRLGQIGESLLKKPVSRVNLETGFSEPIQNGGTNEDALRKFARMLVQERRLREMKSPLTSKGLGHKIPSFSSTSNP* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02550 420 CDD Pat17_isozyme_like 17 367 - -
Pte1g02550 420 Pfam Patatin-like phospholipase 23 228 IPR002641 GO:0006629
Pte1g02550 420 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 229 IPR002641 GO:0006629
Pte1g02550 420 MobiDBLite consensus disorder prediction 397 420 - -
Pte1g02550 420 PANTHER XYLOSE ISOMERASE 4 398 - -
Pte1g02550 420 SUPERFAMILY FabD/lysophospholipase-like 19 379 IPR016035 -
Pte1g02550 420 FunFam Patatin 12 401 - -
Pte1g02550 420 Gene3D Cytosolic phospholipase A2 catalytic domain 10 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02550 Pte-Chr1 45925527 45928261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02550 1 401 Miscellaneous Gene Families AT2G26560 63.092 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02550 - - gmx:100783909 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02550 1 45925527 45928261 Pte1g02550 1 45925527 45928261 RCT