LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g02542	ATGGAGGATGTGAAAAATGCTGAAGACCTGGCACCTTCACATTCCTCTGTAGAAACCCCAAAAGAGGTGATAGCCACAGAATCACCGACAATAGATGCTGACAATAAGATGTCACCAGATAATCATTGTCAGAGTGAAGAAGTGAAGAATTCACTTAGCAATGGGCTAATGGAATCTATCATTCTTCCCCCTAAAGATGCTTCTGATACGCAAACTTTCAAAAAAGACGAATCAGTTCCCCTTGACAATTCAGCATCAACATCAGAATCAGGTCCTACCAAGGAATTGAGCAGTCAGAAGCCTGTAGGTGAACATTTAAATACTGATGCTGCAGAAAGTATCTCCAACCAGCCAAAAACAGAGGAATCGAGCAGTCAGAATGTCTATTCCGAATCTGATATCGTAGACAGAATCTCTGACAGGCTGCATGGCCAGGATCCTGCAGCCTGCTATTCCAAAACTGATATTGTAGATTGTAACTCTGACGGGCCAGACGGTCAGGATGCTGCACATAATGAGCACGAAACTGATGTTGTGGAAGGCAACTCTGAGCGGACACACATTCAGGATGCTGTAATTAATGAGCTAAAAACTGATGTTGTGGAAGGTATCTCCGACAGGCCACACAGTCACGGTACTGAAGTTATTGATTCTGAGATTGATGTTAGGGAAGGTGTCTCTGGCAGGCAAGGAGATGATAGTACTGCTGCCCAAGTACATCATGAAGGTTCAGGTGAACCTACTAAGTATGAGGATGCAAAAAGAGGTCATATAGATACAACGGCACCTTTTGAATCTGTCAAAGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAAGCGCATAAAATCCAAACAGTGGAGAGATGCAAGCTTATAGAACAAGAACTTGAGAAGGTACAGAAAGAGATCCCCCAGTACACAAAACAATCTGAGGCTGCTGAAGACGCAAAAATGCAAGTACTCAAGGAGTTGGACACCACTAAACGGCTTATTGAAGAATTAAAGCTTAATCTAGAGAGGGCACAAACTGAAGAACATCAGGCAAAACAGGATTCAGAACTTGCAAAGCTTAGAGTAGAAGAAATGGAGCAAGGAATTGCAGATGAATCTAGTGTTGCAGCAAAAGCACAGCTCGAAGTTGCCAAAGCCAGGCATACAGCTGCAGTTTCAGAACTTAAATCAGTGAGAGAAGAGTTGGAAACTCTACGGAAGGAATATGCATCTTTGGTAACTGAGAAAGATGAAGCAATTCAAACAGCTGAAGAGGCTGTTGCTGCATCCAAGGAAGTTGAGAAGAAAGTGGAAGATCTAACCATTGAACTAATGGCCACAAAGGAGTCATTGCAGTCATCACATGCTGCTCACATGGAAGCTGAGGAACAGCGAATAGGTGCAGTCATGGCCAGAGAGCAGAATTATCTCAATTGGGAAAAAGAAATGAAACAAGCAGAAGAAGAACTCCAAAAACTTAACCAGCAAATTTCTTCAGCTACAGATTTGAAATCAAAACTAGAAACAGCATCTGCCTTACTTCGTGATTTGAAAGCCGAGCTAGCAGCTTATATGGAATCAAAATTGCAGGAAGGTGATGAAGAGAAATCCATAGTTGACGAAGGGGATCCAGCAAAGCAAACAGAGAAGAAAACCCACACAGATATTCAAGCAGCTGTTGCTTCAGCTAAGAAGGAACTTAACGAGGTCAAGCAAAATATAGAGAAGGCAACTGCTGAAGTTGAATGCTTGAAGGTTGCTGCCACATCGCTGAAATCGGAACTGGAGAAAGAGAAGTCAGTTGTTGCTAATCTAAGACAAAGGGAAGGGATGGGCTCTGTTGCTGCAGCATCTCTTGAAGCTGAACTAGATAAGACAAGGTCAGCAATAGCCATAGTTCAGATGAAAGAGAAAGAAGCAGAGGAGAAGAATACCGAGCTGCCTCAGAAACTACAACTTGCAGCTAAAGAAGCTGATCATTCTAAGGCACTTGCTCAAGCGGCTAGAGAAGAGTTGCAGAAAGCAAAGGAAGGTGCAGAGCTAGCTAAGGCCAGAGCAAGTTCAATGCAAAGTAGATTACTTGCAGCTCAAAGGGAGATAGAGGCTGCAAAGACTTCTGAAAAATTGGCTAGGGAGGCAATAAGAGCATTAAAAGAAAGTGAATCAGCCAATAACAATGGTGATGTGGGTTTACCTGCTGGTGTGGCACTCTCATTAGAGGAGTACTATGATCTCAGCAAACAAGCACACGAAGCTGAGGAGCAGGCAAGCATGAGGATTGCTGCAGCTAATTCTCAAATTGAGTTGGCTAAGGAATCTGAATTGAGAAGCGTTCAGCAGCTGGAGGTAGTGATCAAGGAGAAAGCTGCCAGAAGGGAAGCTCTGAAAGTAGCAATGGAGAAGGCCGAGAAAGCTAAGGAAGGAAAGTTAGGTGTAGAACAAGATTTAAGGAAGTGGAGGTCTGAACATGAACAAAGAAGAAAAGCTGGACAAGGAGTAGTAAATCCAACCAGAGGCCCTACTACTAATGGTGAAAGAAATGGGTCAAACAGACTTGGTGAGGCACCTGACGGTGATGTTCCTGAAGACCACGCAACAAGCTCTAATGATTCCGAAAGTGAAACTGTCGCCAAACCAGACACTTTGACAGAATCAAAGAGTGTAAAGAAAAAGAAGAGGCCTTTTTTCCCAAAGGTTATAATGTTTTTTGCGAGAAGAAAGTCAAATTCGTCAAAGTAA	2736	0.4309	MEDVKNAEDLAPSHSSVETPKEVIATESPTIDADNKMSPDNHCQSEEVKNSLSNGLMESIILPPKDASDTQTFKKDESVPLDNSASTSESGPTKELSSQKPVGEHLNTDAAESISNQPKTEESSSQNVYSESDIVDRISDRLHGQDPAACYSKTDIVDCNSDGPDGQDAAHNEHETDVVEGNSERTHIQDAVINELKTDVVEGISDRPHSHGTEVIDSEIDVREGVSGRQGDDSTAAQVHHEGSGEPTKYEDAKRGHIDTTAPFESVKEAVSKFGGIVDWKAHKIQTVERCKLIEQELEKVQKEIPQYTKQSEAAEDAKMQVLKELDTTKRLIEELKLNLERAQTEEHQAKQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARHTAAVSELKSVREELETLRKEYASLVTEKDEAIQTAEEAVAASKEVEKKVEDLTIELMATKESLQSSHAAHMEAEEQRIGAVMAREQNYLNWEKEMKQAEEELQKLNQQISSATDLKSKLETASALLRDLKAELAAYMESKLQEGDEEKSIVDEGDPAKQTEKKTHTDIQAAVASAKKELNEVKQNIEKATAEVECLKVAATSLKSELEKEKSVVANLRQREGMGSVAAASLEAELDKTRSAIAIVQMKEKEAEEKNTELPQKLQLAAKEADHSKALAQAAREELQKAKEGAELAKARASSMQSRLLAAQREIEAAKTSEKLAREAIRALKESESANNNGDVGLPAGVALSLEEYYDLSKQAHEAEEQASMRIAAANSQIELAKESELRSVQQLEVVIKEKAARREALKVAMEKAEKAKEGKLGVEQDLRKWRSEHEQRRKAGQGVVNPTRGPTTNGERNGSNRLGEAPDGDVPEDHATSSNDSESETVAKPDTLTESKSVKKKKRPFFPKVIMFFARRKSNSSK*	912

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g02542	911	Coils	Coil	387	449	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	797	828	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	797	897	-	-
	Pte1g02542	911	Coils	Coil	661	698	-	-
	Pte1g02542	911	Pfam	Weak chloroplast movement under blue light	255	825	IPR008545	-
	Pte1g02542	911	Coils	Coil	468	526	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	161	182	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	834	848	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	167	182	-	-
	Pte1g02542	911	Coils	Coil	784	804	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	31	57	-	-
	Pte1g02542	911	Coils	Coil	284	353	-	-
	Pte1g02542	911	PANTHER	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	256	906	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	1	141	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	77	133	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	224	253	-	-
	Pte1g02542	911	Coils	Coil	552	607	-	-
	Pte1g02542	911	MobiDBLite	consensus disorder prediction	529	550	-	-
	Pte1g02542	911	Coils	Coil	615	635	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g02542	Pte-Chr1	45880003	45884923	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g02542	-		-	qsa:O6P43_016074	865.529

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pte1g02542	1	45880003	45884923	Pte1g02542	1	45880003	45884923	RCT