Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02518 ATGAAGCGTGGACTTCCCAGTGATGATGATGATAAAAAGATGAAAAAGGTCAAGCTTGAAGACGATGAAGCCGAGGGTGGATTGGATCGACCGGAGACAAAAAATAGCGGAGGGTCTTTGTATTTGGACGATAACCTGTTGTTTGAGGTGTTGAAGCACGTGGATGCGAGGTCTTTGGCTAGCGCGGCTTGTGTCAGCAAGCAGTGGAATAAAACTGCGCAAGACGAGCGACTGTGGGAGCTGATCTGCACTAAGCATTGGGCGAACATCGGTTGTGGTAACCAGCAGCTAAGATCTGTGGTCCTGGCTCTTGGAGGCTTCCGCCGTCTGCACTCCCTGTACATCTGGCCTCTTTCAAGGCCTCAGTCATCTTCTTCCTCTGGTTCGTCGTCATCGCCTTCCGCTTGGGCTCCTCTCCGGTCTATGATTTCTTCCAAGCCACCCAGTCGGTTGGGAAAAGACGAGGTTCATCTGTCTCTGTCGCTACTCTCCATTCGTTATTACGAGAAGATGAATATCAACAACAGGAGCCGATGA 537 0.5065 MKRGLPSDDDDKKMKKVKLEDDEAEGGLDRPETKNSGGSLYLDDNLLFEVLKHVDARSLASAACVSKQWNKTAQDERLWELICTKHWANIGCGNQQLRSVVLALGGFRRLHSLYIWPLSRPQSSSSSGSSSSPSAWAPLRSMISSKPPSRLGKDEVHLSLSLLSIRYYEKMNINNRSR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02518 178 Pfam F-box domain 43 80 IPR001810 GO:0005515
Pte1g02518 178 SMART fbox_2 42 82 IPR001810 GO:0005515
Pte1g02518 178 MobiDBLite consensus disorder prediction 1 36 - -
Pte1g02518 178 Gene3D - 38 140 - -
Pte1g02518 178 SUPERFAMILY F-box domain 41 88 IPR036047 GO:0005515
Pte1g02518 178 FunFam F-box protein GID2 29 137 - -
Pte1g02518 178 PANTHER F-BOX PROTEIN SNE 38 174 IPR044184 GO:0009937|GO:0019005
Pte1g02518 178 MobiDBLite consensus disorder prediction 1 30 - -
Pte1g02518 178 CDD F-box_AtGID2-like 42 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02518 Pte-Chr1 45621144 45622660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02518 K14495 - qsa:O6P43_016020 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02518 1 45621144 45622660 Pte1g02518 1 45621144 45622660 RCT