Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02487 ATGTCATGGTTGGCTCGCTCTTTTGCAAATTCTCTTCGACTTGAAGATGACGATGATGGAGGCAAGAGTGGTGATGACGATGAGGAAGACAACGATGTAGCACCAGTCCAACCTAACGATCTACCACCACAAGGACTGCTTCTTTCTTCTCCCTCATCGTTTTCCTCCACACGAAACGAGAACAATCATTCTCAACCACATCAACTTCAATACCAACAACGACAGAAGCAACAAAATGATTACCAAGAACGTGTCCAGGGATATTCTACTCCAGAAAATGGATCACTGTCTCAATCTCTAACTGAGTATGAACTGCAATCCCGAGGCGTCAAAGATGATCTAAACGAATTCAAACAAACCCTAACCCGCCAGTTCTGGGGTATGGCCAATTTCATAGCTCCACCGCCCAGCAATCATTCTCATCTACAGAATGAGACCGATCCAACTGTATTTAGAGGGATCCAATGCGAACCGCAAGATTTCCAATATAACGATCAAGAATCGATGTCGGACGCTTTGATTTCTGGAAATCGCAGCGAATTATCTGAAATGGAGGCGAGGTTGAGAACCGAGGTACCTGAAACCTGCAGACACGATCCGAATCTGGATCGACTTGGATCCGAGTCAGAGAGGAACGAGGATTCCGGAAATGAGGAATGGGATACAGGACAAGAAACTGAAGTTGAAGTTGTGGGCATTACAGAGGAAGTGTTGGCGTTCGCCATGAACATAGCCATGCATCCAGAGACTTGGTTAGATTTTCCTATTGAAGAGGAAGAAGACACGGATGACTTTCAAATGTCCGCTGCCCAAAAATACCATGCATTAGCCATTGAGAGACTCGCTCCTAGATTAGCTGCTCTGAGAATTGAACTGTGTCCTTGCCACATGAGTGAGAGCTACTTTTGGAAAGTCTATTTCGTATTGTTGCATTCAAGGCTCAATAAACGGGATGCGGAGTTTTTGTCAACATCTCAGGTTATGGCTGCCAGAGCCAAGTGGATGCAGGAACTTCATAAGCAAATGCAGCCTCCATCTGACCGGTTTTCAATGAGCACTTCTTATTCGAAAGACATATTATTGCATGATGATCCACATCCTGGCTTGCTAAACGATTCTTATTCAGAAAGCACGCCTCATGGAACATATATATATGAATTCACAACTCCTACCATGAGAACAGACTTTGAAATTGAGAAGCATATGGTCGAAACATCGGGGATGCATTATGTGGATAAGCCTGTTATTGTGGAAAAGCCAGCGATCAAAACTGACATGAAGAATATGATGATTGATCAATTGATTCAAGAATGTGATGATGATAATGACTGGCCAGAATATGATTCTGACTTTGGCGGAACCACCATTCCCATTGAGAATGAAGATGACATATCTTTCAGTGATCTTGAGGATGATAGTTTTGACAAATTTCTTGTAAAATCCAATACAGTTCAAAATGCATGA 1464 0.4296 MSWLARSFANSLRLEDDDDGGKSGDDDEEDNDVAPVQPNDLPPQGLLLSSPSSFSSTRNENNHSQPHQLQYQQRQKQQNDYQERVQGYSTPENGSLSQSLTEYELQSRGVKDDLNEFKQTLTRQFWGMANFIAPPPSNHSHLQNETDPTVFRGIQCEPQDFQYNDQESMSDALISGNRSELSEMEARLRTEVPETCRHDPNLDRLGSESERNEDSGNEEWDTGQETEVEVVGITEEVLAFAMNIAMHPETWLDFPIEEEEDTDDFQMSAAQKYHALAIERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKRDAEFLSTSQVMAARAKWMQELHKQMQPPSDRFSMSTSYSKDILLHDDPHPGLLNDSYSESTPHGTYIYEFTTPTMRTDFEIEKHMVETSGMHYVDKPVIVEKPAIKTDMKNMMIDQLIQECDDDNDWPEYDSDFGGTTIPIENEDDISFSDLEDDSFDKFLVKSNTVQNA* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02487 487 SMART wurzfinal6 262 314 IPR005607 -
Pte1g02487 487 ProSiteProfiles BSD domain profile. 261 314 IPR005607 -
Pte1g02487 487 MobiDBLite consensus disorder prediction 191 218 - -
Pte1g02487 487 SUPERFAMILY BSD domain-like 232 318 IPR035925 -
Pte1g02487 487 MobiDBLite consensus disorder prediction 191 225 - -
Pte1g02487 487 Pfam BSD domain 262 318 IPR005607 -
Pte1g02487 487 MobiDBLite consensus disorder prediction 43 98 - -
Pte1g02487 487 MobiDBLite consensus disorder prediction 1 98 - -
Pte1g02487 487 MobiDBLite consensus disorder prediction 20 34 - -
Pte1g02487 487 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 474 - -
Pte1g02487 487 Gene3D BSD domain 227 324 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02487 Pte-Chr1 45392401 45395801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02487 232 314 EF-hand Containing Proteins AT1G69030 29.032 9.21e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02487 - - qsa:O6P43_019036 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02487 1 45392401 45395801 Pte1g02487 1 45392401 45395801 RCT