Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02480 ATGGCTCCTTCGTTTGCTTGGTGGGCAACAGAAAGCCAGAAAGGAACTCCTGTAGTGGTGAAGATGGAGAACCCCAAGTGGTCCATGGTTGAAATCGAGGGTCCTTCAGAGGAAGACTTCCTCATTTCCGGCTCGCCGGCTCGTCCCAGAGACAAAGGCAGAGGCAAAAATGCCAAGCAGCTGACATGGGTTCTTCTCCTCAAAGCACACCGAGCCGCCGGTTGCTTGACCTCCATTGCTCCAGCATTGGTCGGCATCGCCTCTGCAGTGAGGCGCCGGGTGTCCTCTGGGAGAACTGATGCCGATGCCGACAATGAAATCGAAACTGATGGCGGCAGAGAAATTGAAAAACCCCCTGTCAAAAGCAGGTTCTACTCGTGTATCAAGCTCTTCTTGTGCTTGTCTGTGTTGCTGTTGTGTTTTGAGGTGTCAGCCTACTTCAAAGGATGGCATTTTGGTGCAACACAGCTCCAATTTCAGTATTTTTGGGCATACTCATTGGACTTTAAGGGTATGTTTGATTCGATTTATTCCCGGTGGGTTGTAATACGTGTGGAATATCTTGCTCCTCCTTTGCAATTTCTAGCCAATGTCTGTATTGTGCTATTCATTATCCAGAGTGTGGATAGGTTGATACTGTGTTTGGGTTGTTTCTGGATCCGATTTAAGAAGATCAAACCTCTTCCCAAAGAAGGTGCAATAGATCTTGAATCTGGCGAGAATGGGTTTTCCCCCATGGTGTTGGTTCAGATCCCAATGTGCAACGAAAGAGAGGTCTACCAGCAGTCCATCTCTGCGGTTTGCAATTTAGATTGGCCTAAATCAAAGTTGCTAATTCAAGTCCTGGACGATTCTGATGACCCTACAACACAAGCCTTGATAAATGACGAAGTTCTTAAATGGCAGCAAGAGGGTGCCAACATTGTGTATCGTCATCGTGTCATTAGGGATGGATACAAAGCCGGCAATCTCAAATCTGCAATGAATTGTAGTTATGTAAAAGATTACGAGTTTGTTGCTATCTTTGATGCCGACTTTCAGCCTAGTTCTGACTTCCTCAAGAAAACAGTTCCTCATTTTAAGGACAATGAGGAACTGGGGCTGGTTCAGACAAGATGGTCTTTTGTGAATAAGGATGAGAACCTGCTTACAAGATTGCAGAACATTAATTTGGCGTTCCATTTTGAGGTGGAACAGCAAGTGAACGGTGTTTTCATCAATTTCTTCGGATTCAATGGAACTGCTGGTGTGTGGAGAAAAACGGCTTTGGAGAACTCTGGTGGTTGGTTGGAGAGGACTACTGTGGAGGACATGGATATCGCTGTTCGAGCTCATCTCCATGGCTGGAAATTTATCTTCCTCAATGATGTTGAGTGCCAATGCGAATTACCGGAATCTTATGAAGCATATAGGAAACAACAGCATAGATGGCATTCTGGGCCTATGCAGCTATTTAGACTTTGTTTGCCTGATGTTATTCGAGCCAAGGTATACTCTTTGAGAGCCTTGTACACTTTCATAAGTGTTCTTCTGCTGTCTAATATATTGTCTGGACAATGTTCTTCGATCTGTTTTGCAGATCAGCATATGGAAGAAATTCAACATGATATGCCTTTTCTTTCTTCTGAGGAAATTGATATTACCCTTCTACTCTTTTACCTTGTTCTGTATAATTCTCCCAATGACAATGTTTGTGCCAGAGGCTGA 1707 0.4441 MAPSFAWWATESQKGTPVVVKMENPKWSMVEIEGPSEEDFLISGSPARPRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIAPALVGIASAVRRRVSSGRTDADADNEIETDGGREIEKPPVKSRFYSCIKLFLCLSVLLLCFEVSAYFKGWHFGATQLQFQYFWAYSLDFKGMFDSIYSRWVVIRVEYLAPPLQFLANVCIVLFIIQSVDRLILCLGCFWIRFKKIKPLPKEGAIDLESGENGFSPMVLVQIPMCNEREVYQQSISAVCNLDWPKSKLLIQVLDDSDDPTTQALINDEVLKWQQEGANIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPSSDFLKKTVPHFKDNEELGLVQTRWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFINFFGFNGTAGVWRKTALENSGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIRAKVYSLRALYTFISVLLLSNILSGQCSSICFADQHMEEIQHDMPFLSSEEIDITLLLFYLVLYNSPNDNVCARG* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02480 568 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 240 462 IPR029044 -
Pte1g02480 568 Pfam Glycosyl transferase family group 2 339 512 IPR001173 -
Pte1g02480 568 FunFam probable xyloglucan glycosyltransferase 5 239 463 - -
Pte1g02480 568 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 179 523 - -
Pte1g02480 568 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 510 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02480 Pte-Chr1 45312927 45316393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02480 1 497 Miscellaneous Gene Families AT4G07960 74.359 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02480 - - qsa:O6P43_015951 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02480 1 45312927 45316393 Pte1g02480 1 45312927 45316393 RCT