Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02477 ATGGACCCTTTCAAGATTGTCTTGGTTGGATATCATGCTCACAGTGATTACTTGTGCACATCAGAGGTGCAACATGCAATTCCTGTTTTGAAGAAAGTATACGTAGATAGCATGCATAAGGTTTTACATGTTGGCCCTGATACTTGTGATGTGATGTCTCAATTGCTCAAGAGGAGACTGAAGCATGGGGAATTAATGAATTTGATGGCGAAAATAAGAGGGGACAAAGTGAAGTTCAGTCCAAACAAGCTTGTACTCACCGCTGGTGCAACTGCAGCAAACGAAGCACTCATGTTTTGCCTGGCTGAGCCGGGTGAAGCTTTTCTTCTTCCCACACCATACTATCCTGGGGTTGACAGGGATCTAAAATGGCGGACTGGAGTCGAAATTGCCCCTGTACATTGCTATAGCTCCAATGGATTTAGAATTACAACGCCAGCACTTGAAAAAGCGTACCGACAAGCCCAAAAACTAAACCTTCGCGTCCAAGGTGTGCTCAGAACTAATCCTTCAAATCCGTTGGGCACAACCATGACGAAATCCGAGCTTAGCAAAATCATCGATTTCACCATCGCCAAAAACATGCATGTAGTAAGCGATAAGATATATTCTGGAACAGTCTTTGATTTTCCAAGATTTACAAGCATTATGGAAGTTCTAATGGACAGAGACCTCAACCACACTGGCATAATGGGACCGTGTTCACATTGTTTAAGTCTCTCAAAAGACTTTGGTCTGCCAGGTTTTAGAGTGGGCATGATTTACTCGAACAATGAAGCTGTTGTGGCTGCAGCTACCAAAATGTCAAGCTTCGGACTAGTTTCTTCTCAAACGCAGCATTTACTCGCAAATGTACTTTCCGACAAGAAATTCACTTGA 879 0.4323 MDPFKIVLVGYHAHSDYLCTSEVQHAIPVLKKVYVDSMHKVLHVGPDTCDVMSQLLKRRLKHGELMNLMAKIRGDKVKFSPNKLVLTAGATAANEALMFCLAEPGEAFLLPTPYYPGVDRDLKWRTGVEIAPVHCYSSNGFRITTPALEKAYRQAQKLNLRVQGVLRTNPSNPLGTTMTKSELSKIIDFTIAKNMHVVSDKIYSGTVFDFPRFTSIMEVLMDRDLNHTGIMGPCSHCLSLSKDFGLPGFRVGMIYSNNEAVVAAATKMSSFGLVSSQTQHLLANVLSDKKFT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02477 292 Pfam Aminotransferase class I and II 63 291 IPR004839 GO:0009058|GO:0030170
Pte1g02477 292 CDD AAT_like 73 288 - -
Pte1g02477 292 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 257 - -
Pte1g02477 292 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 105 126 - -
Pte1g02477 292 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 195 218 - -
Pte1g02477 292 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 83 103 - -
Pte1g02477 292 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 288 - -
Pte1g02477 292 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 159 183 - -
Pte1g02477 292 SUPERFAMILY PLP-dependent transferases 64 290 IPR015424 -
Pte1g02477 292 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pte1g02477 292 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 64 291 - -
Pte1g02477 292 Gene3D - 64 288 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02477 Pte-Chr1 45285634 45291458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02477 K01762 - qsa:O6P43_015946 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02477 1 45285634 45291458 Pte1g02477 1 45285634 45291458 RCT