Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02442 ATGGCTTCTACTTCAATGACTCTACCAGTGACCTGTGCTGTGCAGAATGGGACGAACCAACCGTCAAAGGGTACCTTCATTAGGCCATTGCCTATCAGGGAATCAAACAATTATTTGGCTTTGAAGCCCAAATCCAAAGTCAGGCCGCAAGTACATGCATCTTTGAAGGAGAAGTTAGTGACTGGTCTGACCGCAGCTGCTTTGACAACCTCCATGGTGATTCCCGACATAGCAGAGGCTGCTGAATCCAGTGTTTCCCCATCTCTCAAGAACTTCTTGCTCAGCATTGCGGCCGGAGGAATTGTGGTTGGGGCGATCTTTGGAGCTGTTATTGGTGTTTCAAACTTCGACCCTGTCAAGAGAACCTGA 369 0.4851 MASTSMTLPVTCAVQNGTNQPSKGTFIRPLPIRESNNYLALKPKSKVRPQVHASLKEKLVTGLTAAALTTSMVIPDIAEAAESSVSPSLKNFLLSIAAGGIVVGAIFGAVIGVSNFDPVKRT* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02442 122 PANTHER OS07G0673550 PROTEIN 1 122 - -
Pte1g02442 122 Gene3D Single helix bin 84 122 - -
Pte1g02442 122 Pfam Photosystem II reaction centre X protein (PsbX) 85 121 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02442 Pte-Chr1 45007948 45008316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02442 - - tcc:18588132 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02442 1 45007948 45008316 Pte1g02442 1 45007948 45008316 RCT