Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02441 ATGATAGCTTATTTGGAACACTCCCTGCATGGGAACGACATCGAATCGAGGCCGGATGATGAACTCACAACGCTATACAAAGCACTTGACCTCCAAGTCACCATCGACTGTGGTCCTTCTTCTACCATAGCCAGCAAGGATTTCGGCGGCATGCAATCCATCAAACCCATGGCTCTCATCAGGCCGGCGGTTCCAGATGACGTAGCTCGTGTTATCAAAGCCGCTTCGCGGTCGTCAAACCTCACTGTCGCAGCAAGAGGCAACGGACACTCCATTAACGGCCAAGCGATGGCTGACAATGGACTCGTCATAAACATGCGATCCATGGAGGGCAGTTACTTTGAAGTGGTCAGAGTAAATGGTGTCTCATTCGTTGACGTTTCAGGAGGGGCATTATGGGAAAACGTGCTCGAGCGGTGTGTACGCGATTATGGGCTCGCACCAAGGTCATGGACAGATTATTTGAGTTTGACGGTTGGCGGGACGTTATCTAACGCTGGCGTTAGCGGCCAAGCCTTCCGTTACGGCCCACAAACATCGAATGTAACGGAACTGGAGGTTGTTACCGGGACGGGAGATATAGTTTTGTGTTCAGAAACTGAAAACTGTGAACTTTTCTTTTCAGTTCTTGGGGGACTTGGTCAGTTTGGTATCATCACGAAAGCTAGAGTTCTGCTTCAGTCAGCTCCAGATATGGTAAGATGGATAAGGGTGGTTTATAATGAGTTCGATGACTTCACTCGGGACGCTGAGTACCTCGTGACTCGGCCAGAAGGAGAGGATTCGTTTGACTACGTGGAAGGTTTTGTGTTCGTGAATAATGAAGACCCATTTAATGGGTGGCCCACTGTGCCGTTGGACCCGGAGCACGGTTTCGATCGGACTCATGTGCCTGCTACCGAAGTCCCTGTTCTCTACTGCCTGGAAATGGCACTCCACTACCAAAACACCGATGAAGCTTGTGAAGTCGATAAGACGGTAGATAGATTGCTTGAAAAGTTGAGATTCGAAGAGGGATTGAAATTCCAGATAAACGTTAGGTACACGGAGTTCTTGATGCGGGTAAAAAACGCTGAGGGACATGCGAAAGCCAATGGCATTTGGAACGCGCCCCATCCTTGGTTGAACTTGTTTGTATCCAAATCTGACATTGCTTATTTTGACGAGGTAGTCTTCAGGAGGATCCTCAAAGATGGAGTCGGTGGCCCCATGTTGATCTACCCACTACTGCGAAGCAAGTGGGATTCTCGTACATCGGTAGTGTTGCCAATGGAAGAAATATTCTACTTAGTTGCATTACTGCGTTTTTCTCCTTCGCACCCAACAGGTCCGCCAGTTGAGAAGTTGGTTAATCAAAACCACGAGATTATCAAATGGTGCACCCGAAGAGAAATTGATTTTAAATTGTACCTCCCTTACTACCAGTCACAGGAGGATTGGAGAAGACATTTTGGGAAGAATAATTGGAATAGGTTCGTAGAAAGAAAGGCCAATTTTGATCCCCTGGCTATCCTTGCTCCTGGACAGAAAATTTTCTCAAGAATATCTCAACCTTAG 1557 0.4753 MIAYLEHSLHGNDIESRPDDELTTLYKALDLQVTIDCGPSSTIASKDFGGMQSIKPMALIRPAVPDDVARVIKAASRSSNLTVAARGNGHSINGQAMADNGLVINMRSMEGSYFEVVRVNGVSFVDVSGGALWENVLERCVRDYGLAPRSWTDYLSLTVGGTLSNAGVSGQAFRYGPQTSNVTELEVVTGTGDIVLCSETENCELFFSVLGGLGQFGIITKARVLLQSAPDMVRWIRVVYNEFDDFTRDAEYLVTRPEGEDSFDYVEGFVFVNNEDPFNGWPTVPLDPEHGFDRTHVPATEVPVLYCLEMALHYQNTDEACEVDKTVDRLLEKLRFEEGLKFQINVRYTEFLMRVKNAEGHAKANGIWNAPHPWLNLFVSKSDIAYFDEVVFRRILKDGVGGPMLIYPLLRSKWDSRTSVVLPMEEIFYLVALLRFSPSHPTGPPVEKLVNQNHEIIKWCTRREIDFKLYLPYYQSQEDWRRHFGKNNWNRFVERKANFDPLAILAPGQKIFSRISQP* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02441 518 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 230 512 IPR015345 GO:0009690|GO:0019139|GO:0050660
Pte1g02441 518 Pfam FAD binding domain 57 197 IPR006094 GO:0050660
Pte1g02441 518 Gene3D - 44 513 IPR016167 -
Pte1g02441 518 SUPERFAMILY FAD-linked oxidases, C-terminal domain 230 512 IPR016164 GO:0003824|GO:0050660
Pte1g02441 518 Gene3D - 233 470 IPR016170 -
Pte1g02441 518 Gene3D - 106 231 IPR016169 -
Pte1g02441 518 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 226 IPR036318 GO:0050660
Pte1g02441 518 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 229 IPR016166 GO:0071949
Pte1g02441 518 PANTHER GULONOLACTONE OXIDASE 29 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02441 Pte-Chr1 44995717 45000250 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02441 K00279 - qsa:O6P43_015842 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02441 1 44995717 45000250 Pte1g02441 1 44995717 45000250 RCT