Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02432 ATGGCTAATGAACGAGACCTGTTATCCACAGAGATCGTCAACCGAGGAATCGAGTCATCTGGACCTAACGCTGGTTCGCATACCTTCTCTGTAAGGGTCCGGAGGCGACTGCCCGACTTCCTTCAATCAGTGAACCTTAAGTATGTGAAATTAGGTTACCATTATCTCATCAATCATGGCATATACTTGGCTACAATACCTGTCCTCGTGCTAGTGTTCAGTGCAGAAGTTGGAAGCCTCAGCAAGGAAGAACTCTGGAAAAAGCTTTGGGAAGATGCCCGCTGTGACCTTGCCAGCGTGCTTGGTTTCTTTGGCGTCTTCGTCTTCACCTTGTCTGTGTACTTCATGTCCCGTCCTCGTCCCATTTACCTTATCGATTTTGCATGCTATCGACCAAAAGATGATTTCATGGTGACCAGGGAGGAGTTGATAGAACTGGCGAGAAAATCAGGCAAGTGTGATGAGGCTGGACTGGAATTTCAGAAGAGGATCTTGATGTCATCAGGCATAGGAGACGAGACGTATGTCCCAAAGTCTGTGATTGCATCGAATGAGAACTCAGCAACTATGAAAGAAGGTCGTGCTGAGGCATCAATGATGATGTTTGGAGCACTGGATGAACTGTTTGAGAAAACTCGTGTGCGTCCCAAAGACGTAGGGGTGTTGGTAGTAAATTGCAGCATATTCAATCCTACGCCATCTCTCTCAGCCATGATCATCAACCACTACAAGATGAGGGGCAACATATTGAGCTACAACCTTGGAGGGATGGGCTGCAGTGCTGGGATTATAGCAGTGGACTTGGCGAGGGACATCCTTCAATCAAACCCCAATAACTATGCTGTGGTTGTGAGCACTGAGATGGTTGGATTCAATTGGTATCAGGGTAAAGACAGGTCCATGCTGATTCCAAATTGCTTCTTCCGTATGGGCTGCTCTGCTGTTCTTCTCTCAAATCGTCGACGTGACTATAGGCGAGCTAAGTATCGCCTCGAACATATTGTCCGTACTCATAAAGGCGCTGACGATCGCAGCTTCAGGTGCGTGTACCAAGAGGAAGATGAACAGAGGCATAAGGGCCTAAAGGTGAGCAAAGACCTGATGGTTATCGGAGGTGAGGCTCTAAAGACCAACATCACCACACTTGGACCTCTTGTGCTGCCGTTCTCAGAGCAGCTACTCTTCTTTGCTAGCCTTGTTTGGAGGCACTTAGCTGGCGGGGGCAAAGCTGCTGGGAATTCTTCTCCCAAAAAACCATACATCCCAGATTACAAGCTTGCATTTGAGCATTTCTGTGTGCATGCTGCAAGCAAGACTGTTCTTAATGAGCTCCAGAGGAATCTAGAGTTGAGTGACAAGAACATGGAAGCATCTAGGATGACACTGCATAGATTTGGCAACACGTCCAGCAGCAGCATATGGTATGAGTTAGCTTACGTAGAAGCCAAGGAGAGAGTTAGGAGAGGGGACCGGGTTTGGCAACTGGCTTTTGGCTCTGGCTTCAAGTGCAACAGCGTGGTTTGGCGGGCCATGCGCCGAGTTAAGAAGCCTTCTTGGAACCCATGGCTGGACTGTATTGAAAGATACCCTCTGGCATCTCAAAGGCAAACTCTTTAA 1617 0.4805 MANERDLLSTEIVNRGIESSGPNAGSHTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLATIPVLVLVFSAEVGSLSKEELWKKLWEDARCDLASVLGFFGVFVFTLSVYFMSRPRPIYLIDFACYRPKDDFMVTREELIELARKSGKCDEAGLEFQKRILMSSGIGDETYVPKSVIASNENSATMKEGRAEASMMMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKDRSMLIPNCFFRMGCSAVLLSNRRRDYRRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQRHKGLKVSKDLMVIGGEALKTNITTLGPLVLPFSEQLLFFASLVWRHLAGGGKAAGNSSPKKPYIPDYKLAFEHFCVHAASKTVLNELQRNLELSDKNMEASRMTLHRFGNTSSSSIWYELAYVEAKERVRRGDRVWQLAFGSGFKCNSVVWRAMRRVKKPSWNPWLDCIERYPLASQRQTL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02432 538 Coils Coil 441 461 - -
Pte1g02432 538 CDD CHS_like 98 508 - -
Pte1g02432 538 Gene3D - 132 510 IPR016039 GO:0016746
Pte1g02432 538 SUPERFAMILY Thiolase-like 108 327 IPR016039 GO:0016746
Pte1g02432 538 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 429 509 IPR013747 -
Pte1g02432 538 SUPERFAMILY Thiolase-like 332 510 IPR016039 GO:0016746
Pte1g02432 538 PANTHER 3-KETOACYL-COA SYNTHASE 103 531 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pte1g02432 538 FunFam 3-ketoacyl-CoA synthase 132 510 - -
Pte1g02432 538 Pfam FAE1/Type III polyketide synthase-like protein 114 403 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pte1g02432 538 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 538 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02432 Pte-Chr1 44920490 44923152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02432 2 531 Miscellaneous Gene Families AT2G26250 78.506 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02432 K15397 - zju:107420173 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02432 1 44920490 44923152 Pte1g02432 1 44920490 44923152 RCT