Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02386 ATGAAGCAGAGTTCGCCTGAGGCAGTATCGACCTCATGCTCTGTACCTTCTATATCAGACCAGTCGCAAGCCACCTATACTTCTTCATCAACAGCAAGAACAGCGTCTTCCTCAGTCGACAAATTTTCGTCGATGGCAGCGGCAGTGGAGGACTTGGCCGTGGGGTATAGAGATTGTGGCGGCGCCCAAGAATCTGTTGTTGTCGATCGGAGGGGTGAGTACTCCGCTGTCTGTCGATGGACGGTACATAATTTTCCGAAAATCAAAGCTAGGGCACTTTGGAGCAAGTACTTCGAAGTTGGAGGCTATGATTGCCGTCTCTTGATATACCCTAAAGGTGACTCTCAGGCGTTGCCCGGATACATCTCCATATACCTTCAAATCATGGACCCTCGGGGCACGTCTTCGTCTAAATGGGACTGCTTTGCCAGTTACCGTTTGGCAATCGTTAATCTCGCGGACGATTCCAAGACTGTGCATCGCGATTCATGGCATAGATTCTCAAGCAAGAAGAAATCGCATGGTTGGTGCGATTTCATGGCATCCTCAACTGTTTTTGATCCCAAGTTGGGTTATCTGATTAATAATGATTCCGTATTGATTACGGCTGATATACTAATACTTAATGAATCGGTTAATTTTTCTCGTGATAATAATGAAATGCAATCATCCGCCTCGACTTCCTCCTCGGTCATATCTTCCTCCGTCGTTAATGGTCCAGTGTCTGATGTTCTGAGTGGCAAATTCACTTGGAAAGTTCACAACTTTAGTTTGTTCAAGGAGATGATTAAGAATCAGAAGATAATGAGTCCAGTTTTCCCTGCTGGAGAGTGTAATTTGAGGATTAGTGTTTATCAGAGCTCAGTTAACGGTGTTGAGTATTTGTCAATGTGTTTAGAGAGCAAGGATACGGAGAAGGCAGTTATGCTGTCCGATAGGAGTTGTTGGTGTTTGTTTAGGATGTCTGTGTTAAACCAGAAGCCTGGTTCCAATCACATGCATAGAGATTCATATGGCCGGTTTGCAGCAGATAATAAGAGTGGCGACAATACTAGTTTGGGATGGAATGATTATATGAAAATGTCTGATTTGATTGGTTCGGATTCAGGGTTCTTGGTGGATGACACTGCCGTGTTTAGCACTTCTTTCCATGTCATCAAGGAGTCCAGTAGTTTCTCTAAGAATGGGGTTTCGGTTGTTGGTAGAAGTGGGAGTGGCACTAGGAAGTCAGATGGTCACATGGGAAAGTTCACCTGGAGAATTGAAAATTTTACAAGGTTGAAGGATCTTCTGAAGAAAAGAAAAATCACTGGCCTTTGTATTAAAAGCAGGAGGTTTCAGATTGGTAATCGTGACTGCCGTCTCATTGTTTATCCTAGAGGGCAGTCTCAACCACCATGCCACCTTTCAGTTTTTCTTGAAGTTACAGATCCACGCAATACTTCCACTGATTGGAGTTGCTTTGTAAGCCACCGTTTGTCAGTTGTGAACCAGAGAACGGAAGACAAGTCTGTGACAAAGGAATCTCAAAATCGGTATTCCAAAGCTGCAAAGGACTGGGGTTGGCGTGAATTTGTGACACTCACAAGCCTTTTTGATCAAGATTCTGGTTTTCTGGTTCAGGACACTGTTGTATTCTCAGCAGAGGTTCTGATTTTGAAAGAGACATCACTGATGCAGGAATTTGCCGATCCAAAGCCTGAAACAGTGAGTACTGGCTCCAATCTTGAAAGGTTCGGGAAAAGAAGTTCATTTACATGGAAAGTAGAGAACTTCCTCTCGTTCAAGGAGATAATGGAGACTCGAAAAATATTCAGTAAATTCTTCCAGGCTGGTGGATGTGAGCTTCGCATTGGTGTATACGAGTCCTTTGACACCATATGTATATATTTAGAGAGTGATCAGTCTGCTGGCAGCGATCCAGATAAAAACTTCTGGGTCAGGTACAGGATTGCTGTGGTAAATCAGAAGAATCCAGCCAAGACTGTGTGGAAGGAGTCCTCAATTTGTACAAAGACATGGAACAATTCTGTTTTACAATTCATGAAGGTTTCTGATATGTTGGAGGCAGATGCAGGGTTCCTTGTGCGTGACACTGTTGTTTTTGTTTGTGAGATATTGGACTCGTGCCCTTGGTTTGAGTTTTCAGATTTGGAGGTTTTAGCTTCAGAGGATGATCAGGATGCTTTAACAACTGACCCTGATGAACTCGCTGACACTGAAGAAAGTGAAGAAATAAGTGCAGATGAAGAAGAAGATATTTTTAGAAGCCTACTTTCTACTGCTGGTTTTCACCTATCATATGGAGATAGCTCTTCACAGCCGCAAGTGACGTTAAGAGAGAAGCTCCTAGTGGATGCTAGTGCGATCGCTGGATTTCTGACTGGACTTCGGCTCTATCTTGATGATCCTGACAAGGCAATTATAGATTTACTTCTCGATATAATGGTTGAGTGCTGCCAACCGTCAGGGGGAGGTTCCAAAGCTGATTCTACTTGCGAAAGCTTGGAACCTTCTACTGGGGCCAACAGAGCTGCTAGTCCTGTGGAATGTGACAGAGGAGATGGAGCAACAGAAGCCAATGAAGTTCCTGCTGACAAGAGATTAGATTCTGTTGCTGAAGAAAATAGCAGGACGACAGCCGTGCAAAGCTCTGAGCTGGATGGGATAGCTCTATCTGGAAAAGCACTTTTTCCTGGACAGCCCATTTCTCCTCCAGAAACCTCTGCTGCTGGTTCTGAGAAGGCTCCTTTTTCCTCGAAGGCCAAGTGGCCAGAGCGATCTGAGGAGCTCTTAGGTTTAATTGTGAATTCATTGAGAACCTTAGATAATGCTGTTCCACAATGTTGTCCAGAGCCCAGACGACGACCTCAATCTGCTCAAAAGATTGCTCTTGTGTTGGACAAATCTCCAAAGCATTTGCAAGCAGATTTACTCTCCTTGGTGCCCAAATTGGTTGATCATTCAGAACATCCATTGGCTGCCTTTGCACTTCTTGAAAGACTACAAAAGCCAGAAGCAGAACCTACCCTGCGTATACCTGTTTTTAGTGCTTTGAGTCAACTGGAGTGTAGCAGTGAAGTATGGGAACGTATCCTGTTTCAATCATTTGAGCTTTTGCAAGATTCAAATGATGAACCACTTGTAGCAACCATAGATTTTGTCTTCAAGGCTGCATCCCAATGTCAACATCTTACTGAGGCAGTGAGATCAGTTCGTGCTAGGCTGAAGAGTTTAGGTATTTGTGTGTCCCTCTGTGTCCTTCACTTTTTAGGTAAAACTGTTAATAGTTGGGGAGATGTTGCAGAAACCATACTTAAGGATATTGATTCTGATGACATTTTGGGTGATAACTCAACATTGCGGAGTGATCTTATCTTATTTGGTGATCGTGGTCCTTCAGAACGGCTGCATATGGTGGATGAGCTGGCTTTGCATGCTAATTGTCATTTTTCTGATATATACATCTTGATTGAGATGTTGTCTATCCCTTGTCTTGCTGTGGAAGCATCTCAAACATTTGAAAGGGCTGTAGCCCGAGGTGCAATTGCAGCTCAATCTGTGGCTTTGGTATTGGAGAGGCGCCTAACTCAAAGGTTGACCATGACTACACAATTTACTGCTGAAAATATGCAGCATCCTGATGCTGTGGCAGGGGGAGATTCAATTAAGCAGATAGGAATTCAACGGGATGATTTTGCATTGGTTATTGGTCTTGCAGAGACCCTAGCCCTCTCTCGAGACTGCTGTGTAAGGGAGTTTGTGAAATCGCTCTATGTAATACTGTTCAGATGGTATGTTGATGAGACTTACCGAGGAAGAATCTTGAAGAGACTTGTTGATCAACTCACTAGCAGTACAGATGGCAGTCGTGATGTAGATTTTGATTTGGATATTTTGGTCACTTTGGTTTATGAGGAGCAGGAAATCATTAGACCTGTTTTGAATATGATGCGAGAGGTAGCTGAACTTGCAAATGTCGATAGAGCCGCACTTTGGCACCAGTTATGTGCTAATGAAGATGAAATGATCCGCTTGCGTGAAGAAAAGAAAGTCGAAGCAACTAATATGTCGAAGGAAAAAGTGGCACTATCACAAAAACTCTCTGATTCTGAGGCTGCAAATAATCGTCTGAAGTCTGAATTAAGAGCTGAGATTGACCGATTATCACGGGAGAAGAAAGAGCTTTCTGAGCAATTACATGAAATTGAAAGCCAGCTTGAGTGGCTCCGCTCAGAGCGAGATGATGAAATGGTGAAGCTTGCTGGAGAGAAAAAAGTTCTTCAAGATCGTCTTCATGATGCAGAAACACAACTTACCCAGTTGAAGACACGTAAACGTGATGAGTTGAAGAAAGTAATTAAGGAGAAGAATGTTCTTGCTGAAAGATTGAAGAGTGCTGAAGCTGCGAGGAAGAGATTTGATGAAGAACTTAAAAGGTATGCGACAGAGAATGTAACTCGTGAAGAAATTAGAAAGTCACTAGAGGATGAAGTTCGTAGATTGACGGAGACAGTTGGGCAAACTGAGGAAGAAAAGCGTGAGAAGGAAGAGCAAGTTGCTCGGTGTGAAGCATATATTGATGGCATGGAATGTAAATTACAAGCTTGCCAGCAATATATCCACACACTCGAGGCTTCACTTCAAGAAGAAATGTCTCGTCATGCCCCTTTATATGGTGCTGGCTTGGAAGCTTTATCGTTGAAAGAGTTGGATACACTTGCTCGCATTCATGAAGAAGGGCTCAGGCAGATTCATGGCCTTCAGCAGCGTAAGACGAGTCCTGCTGGCAGCCCTCTTTTAAGTCCCCATGGACTCGCACATAATCATGGGTTATATCCTGCTGCAGCACCTCCTATGGCCGTTGGGCTGCCTCCATCTCTAATACCAAATGGGGTAGGGATTCATGGCAACGGACATGTGAACGGTGCTGTTGGACCTTGGTTCAACCATTCTTGA 4959 0.4378 MKQSSPEAVSTSCSVPSISDQSQATYTSSSTARTASSSVDKFSSMAAAVEDLAVGYRDCGGAQESVVVDRRGEYSAVCRWTVHNFPKIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLADDSKTVHRDSWHRFSSKKKSHGWCDFMASSTVFDPKLGYLINNDSVLITADILILNESVNFSRDNNEMQSSASTSSSVISSSVVNGPVSDVLSGKFTWKVHNFSLFKEMIKNQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTEKAVMLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDLIGSDSGFLVDDTAVFSTSFHVIKESSSFSKNGVSVVGRSGSGTRKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDPRNTSTDWSCFVSHRLSVVNQRTEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSLMQEFADPKPETVSTGSNLERFGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQSAGSDPDKNFWVRYRIAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDSCPWFEFSDLEVLASEDDQDALTTDPDELADTEESEEISADEEEDIFRSLLSTAGFHLSYGDSSSQPQVTLREKLLVDASAIAGFLTGLRLYLDDPDKAIIDLLLDIMVECCQPSGGGSKADSTCESLEPSTGANRAASPVECDRGDGATEANEVPADKRLDSVAEENSRTTAVQSSELDGIALSGKALFPGQPISPPETSAAGSEKAPFSSKAKWPERSEELLGLIVNSLRTLDNAVPQCCPEPRRRPQSAQKIALVLDKSPKHLQADLLSLVPKLVDHSEHPLAAFALLERLQKPEAEPTLRIPVFSALSQLECSSEVWERILFQSFELLQDSNDEPLVATIDFVFKAASQCQHLTEAVRSVRARLKSLGICVSLCVLHFLGKTVNSWGDVAETILKDIDSDDILGDNSTLRSDLILFGDRGPSERLHMVDELALHANCHFSDIYILIEMLSIPCLAVEASQTFERAVARGAIAAQSVALVLERRLTQRLTMTTQFTAENMQHPDAVAGGDSIKQIGIQRDDFALVIGLAETLALSRDCCVREFVKSLYVILFRWYVDETYRGRILKRLVDQLTSSTDGSRDVDFDLDILVTLVYEEQEIIRPVLNMMREVAELANVDRAALWHQLCANEDEMIRLREEKKVEATNMSKEKVALSQKLSDSEAANNRLKSELRAEIDRLSREKKELSEQLHEIESQLEWLRSERDDEMVKLAGEKKVLQDRLHDAETQLTQLKTRKRDELKKVIKEKNVLAERLKSAEAARKRFDEELKRYATENVTREEIRKSLEDEVRRLTETVGQTEEEKREKEEQVARCEAYIDGMECKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSLKELDTLARIHEEGLRQIHGLQQRKTSPAGSPLLSPHGLAHNHGLYPAAAPPMAVGLPPSLIPNGVGIHGNGHVNGAVGPWFNHS* 1653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02386 1652 Coils Coil 1361 1413 - -
Pte1g02386 1652 CDD MATH 415 550 IPR002083 GO:0005515
Pte1g02386 1652 CDD MATH 247 379 IPR002083 GO:0005515
Pte1g02386 1652 ProSiteProfiles MATH/TRAF domain profile. 75 205 IPR002083 GO:0005515
Pte1g02386 1652 ProSiteProfiles MATH/TRAF domain profile. 414 550 IPR002083 GO:0005515
Pte1g02386 1652 SUPERFAMILY TRAF domain-like 415 556 - -
Pte1g02386 1652 MobiDBLite consensus disorder prediction 1 33 - -
Pte1g02386 1652 CDD MATH 584 706 IPR002083 GO:0005515
Pte1g02386 1652 MobiDBLite consensus disorder prediction 855 874 - -
Pte1g02386 1652 Pfam MATH domain 595 702 IPR002083 GO:0005515
Pte1g02386 1652 Pfam MATH domain 445 552 IPR002083 GO:0005515
Pte1g02386 1652 Pfam MATH domain 83 207 IPR002083 GO:0005515
Pte1g02386 1652 ProSiteProfiles MATH/TRAF domain profile. 246 383 IPR002083 GO:0005515
Pte1g02386 1652 ProSiteProfiles MATH/TRAF domain profile. 582 706 IPR002083 GO:0005515
Pte1g02386 1652 SUPERFAMILY TRAF domain-like 583 706 - -
Pte1g02386 1652 MobiDBLite consensus disorder prediction 823 924 - -
Pte1g02386 1652 MobiDBLite consensus disorder prediction 729 748 - -
Pte1g02386 1652 Coils Coil 1492 1526 - -
Pte1g02386 1652 CDD Prefoldin 1376 1509 - -
Pte1g02386 1652 SUPERFAMILY TRAF domain-like 244 389 - -
Pte1g02386 1652 PANTHER TRAF-LIKE FAMILY PROTEIN 28 806 - -
Pte1g02386 1652 CDD MATH 79 205 IPR002083 GO:0005515
Pte1g02386 1652 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 405 558 IPR008974 GO:0005515
Pte1g02386 1652 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 573 709 IPR008974 GO:0005515
Pte1g02386 1652 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 61 212 IPR008974 GO:0005515
Pte1g02386 1652 SUPERFAMILY TRAF domain-like 74 213 - -
Pte1g02386 1652 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 245 398 IPR008974 GO:0005515
Pte1g02386 1652 Coils Coil 1418 1484 - -
Pte1g02386 1652 SMART math_3 587 687 IPR002083 GO:0005515
Pte1g02386 1652 SMART math_3 77 185 IPR002083 GO:0005515
Pte1g02386 1652 SMART math_3 251 364 IPR002083 GO:0005515
Pte1g02386 1652 SMART math_3 419 531 IPR002083 GO:0005515
Pte1g02386 1652 MobiDBLite consensus disorder prediction 825 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02386 Pte-Chr1 44558338 44566047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02386 - - zju:107421172 2630.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02386 1 44558338 44566047 Pte1g02386 1 44558338 44566047 RCT