Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01970 ATGGCCTCAACACCGCAAAAAGCGACGTCTTACTGTGCCCATGAAAATGATTCCGTTTCCGTTTCCGTTTCTCGGTTGGCAGCTGCTCCATTAGCAGGCAACGAGAATGCTGTTCAAGACTGGACTATCTCATCCACTGACCGCCGAGACGATCAGCTTGGAAAGAAAATCGCCATGGCCTCTGTGATTCCAGAACCTTCTACGAATCCGTCCACAACGAAAGGGATCATTGCTACACCTAGAGCCCAATCTAAGCATCCATTAGATCCTCTATCTGCTGCCGAAATTGCAGTGGCTGTAGGAACAGTACGGGCTGCTGGTTCTACACCTGAGGTGAGAGATAGCATGCGTTTTATTAAAGTAGTTCTACAAGAGCCAGATAAGCGCATCGTTGCTCTTGCAGATGCATATTTCTTCCCCCCTTTCCAACCATCACTACTTCCCAGGACTACTAAAGGAGGGCCTCTCATTCCTAGCAAACTGCCTCCAAGGTTGGCTCGACTTATTGTTTACAACAAGAAGTCAAATGAGACAAGTGTATGGATTGTTGAGCTCTCGGAGGTACATGCAGTAACTCGAGGTGGACATCATCGTGGAAAAGTAATCTCATCTGATGTTGTTCCAGATGTTCAGCCTGCTATGGATGCTGTGGAATATGCAGAATGTGAAGCTGCAGTGAAAGGTTATCCTCTGTTCAGAGAAGCAATGAAGAAGAGAGGTATTGAAGACATGGAACTTGTAATGGTCGATGCCTGGTGTGTTGGTTATCACAGTGATACTGATGCACCTAGCAGAAGACTTGCAAAGCCACTTATATTCTGCCGAAGTGAGAGTGATTGTCCTATGGAAAATGGTTATGCACGCCCTGTTGAAGGCATCTATGTGCTTGTTGATATGCAAAGCGTCAAAGTGATCGAGTTTGAGGACCGAAAATTTGTTCCCCTTCCTCCGATCGATCCATTGAGGAATTATACTCCCGGGGAAACGAGAGGTGGAGTTGACAGAAGTGATGTGAAGCCTCTGCAAATTGTCCAGCCTGAGGGTCCAAGCTTCCGAATTAGTGGATATTTTGTTGAATGGCAGAAGTGGAATTTTCGAATCGGATTCACCCCAAGGGAAGGATTGGTCATACACTCTGTTGCTTATGTTGATGGTAGCAGGGGGAGACGACTGATAGCTAATAGGTTGAGTTTTGTGGAGATGGTGGTGCCTTATGGAGATCCTAATGATCCACATTACAGAAAAAATGCATTTGATGCTGGAGAAGATGGCCTTGGAAAAAATGCTCATTCTCTCAAGAAGGGATGTGATTGTTTAGGTTATGTCAAATATTTTGATGCCCACTTCACAAATTTTACTGGTGGAGTTGAAACTATTGAAAATTGTGTATGCTTGCATGAAGAGGATCATGGAATTCTGTGGAAGCATCAGGATTGGAGAACGGGCTTAGCTGAAGTTCGGAGGTCTAGGCGACTTACAGTTTCATTCATATGTACTGTGGCTAACTATGAATATGGTTTTTACTGGCACTTTTATCAGGATGGAAAAATTGAAGCCGAAGTCAAACTAACTGGAATTCTCAGTTTAGGAGCCTTGCTCCCCGGAGAATCTAGAAAATTTGGTACGACCATTGCACCAGGTTTATATGCTCCAGTTCATCAGCACTTCTTTGTTGCTCGCATGGACATGGCTGTAGATTGCAAACCTGGGGAAGCATTCAATCAGGTGGTGGAGGTGAATGTCAAAGTTGAGGATCCTGGGGAGAATAATGTTCACAATAACGCTTTCTACGCTGAGGAGACTCTGCTCACATCTGAATCACATGCCATGCGCGATTGCAATCCCACAACTGCTCGTCATTGGATCGTTAGGAACACCAGAACGGTCAACAGGACTGGACAACTAACAGGCTACAAACTAGTGCCTGGCTCAAACTGTTTGCCATTTGCTGGTCCAGATGCTAAGTTTTTGCGAAGAGCTTCTTTCTTAAAGCATAATCTTTGGGTTACACCCTATGCAAGAAATGAGTCATTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGCATTGGTGAAGGGCTTGCAACTTGGGTGAAGCAGAACCGATCTTTAGAAGAAACTGATATTGTTCTTTGGTATGTCTTTGGCATCACTCATGTTCCTCGCTTGGAAGACTGGCCTGTTATGCCAGTGGAGTATATTGGTTTTACGCTCATGCCTCATGGCTTTTTCAATTGCTCTCCTGCTGTGGATGTTCCGCCTAATGCCTGTGAATATGATACCAAAGACACCGATGTCAAAGACAATGCCCTTCCAAAACCAATTCAGAACGGTTTGATGGCGAAGTTATGA 2352 0.4481 MASTPQKATSYCAHENDSVSVSVSRLAAAPLAGNENAVQDWTISSTDRRDDQLGKKIAMASVIPEPSTNPSTTKGIIATPRAQSKHPLDPLSAAEIAVAVGTVRAAGSTPEVRDSMRFIKVVLQEPDKRIVALADAYFFPPFQPSLLPRTTKGGPLIPSKLPPRLARLIVYNKKSNETSVWIVELSEVHAVTRGGHHRGKVISSDVVPDVQPAMDAVEYAECEAAVKGYPLFREAMKKRGIEDMELVMVDAWCVGYHSDTDAPSRRLAKPLIFCRSESDCPMENGYARPVEGIYVLVDMQSVKVIEFEDRKFVPLPPIDPLRNYTPGETRGGVDRSDVKPLQIVQPEGPSFRISGYFVEWQKWNFRIGFTPREGLVIHSVAYVDGSRGRRLIANRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYVKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALLPGESRKFGTTIAPGLYAPVHQHFFVARMDMAVDCKPGEAFNQVVEVNVKVEDPGENNVHNNAFYAEETLLTSESHAMRDCNPTTARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPFAGPDAKFLRRASFLKHNLWVTPYARNESFPGGEFPNQNPRIGEGLATWVKQNRSLEETDIVLWYVFGITHVPRLEDWPVMPVEYIGFTLMPHGFFNCSPAVDVPPNACEYDTKDTDVKDNALPKPIQNGLMAKL* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01970 783 Pfam Copper amine oxidase, N2 domain 86 185 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 SUPERFAMILY Amine oxidase catalytic domain 335 754 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 Gene3D - 217 319 - -
Pte1g01970 783 PANTHER COPPER AMINE OXIDASE 81 764 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 Pfam Copper amine oxidase, enzyme domain 341 749 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 SUPERFAMILY Amine oxidase N-terminal region 84 211 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 Gene3D - 71 215 - -
Pte1g01970 783 SUPERFAMILY Amine oxidase N-terminal region 211 329 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 FunFam Amine oxidase 217 320 - -
Pte1g01970 783 Gene3D Copper amine oxidase, catalytic domain 328 754 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 Pfam Copper amine oxidase, N3 domain 212 316 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Pte1g01970 783 FunFam Amine oxidase 331 756 - -
Pte1g01970 783 FunFam Amine oxidase 70 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01970 Pte-Chr1 40970601 40977836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01970 K00276 - qsa:O6P43_022668 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01970 1 40970601 40977836 Pte1g01970 1 40970601 40977836 RCT